SNR190 (YNCJ0004C)

Gene profile

Gene name: SNR190
Reference locus (S288C): YNCJ0004C
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:128056-128245:- gene-YNCJ0004C_AKU4011 rna-NR_132194.1_AKU4011 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:485476-485666:+ gene-YNCJ0004C_BG1 rna-NR_132194.1_BG1 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:139892-140081:- gene-YNCJ0004C_Bruggeman rna-NR_132194.1_Bruggeman Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:143674-143864:- gene-YNCJ0004C_CAT1 rna-NR_132194.1_CAT1 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:133689-133878:- gene-YNCJ0004C_CBS1585 rna-NR_132194.1_CBS1585 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005352.1:158442-158631:- gene-YNCJ0004C_CBS436 rna-NR_132194.1_CBS436 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:130099-130287:- gene-YNCJ0004C_CBS6412 rna-NR_132194.1_CBS6412 Unknown 98.9 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:131162-131351:- gene-YNCJ0004C_CBS6413 rna-NR_132194.1_CBS6413 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:122149-122338:- gene-YNCJ0004C_CENPK1137D rna-NR_132194.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:132214-132403:- gene-YNCJ0004C_EthanolRed rna-NR_132194.1_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:137692-137881:- gene-YNCJ0004C_FaliES1 rna-NR_132194.1_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000099.1:18869-19059:- gene-YNCJ0004C_JAY291 rna-NR_132194.1_JAY291 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:142161-142350:- gene-YNCJ0004C_MUCL30387 rna-NR_132194.1_MUCL30387 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:138195-138384:- gene-YNCJ0004C_MUCL30388 rna-NR_132194.1_MUCL30388 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:132431-132620:- gene-YNCJ0004C_MUCL39482 rna-NR_132194.1_MUCL39482 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:137952-138141:- gene-YNCJ0004C_MUCL42920 rna-NR_132194.1_MUCL42920 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:139740-139929:- gene-YNCJ0004C_NCIM3186 rna-NR_132194.1_NCIM3186 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:131040-131229:- gene-YNCJ0004C_NCYC1407 rna-NR_132194.1_NCYC1407 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:143847-144037:- gene-YNCJ0004C_PE2H3 rna-NR_132194.1_PE2H3 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:143489-143679:- gene-YNCJ0004C_PE2H4 rna-NR_132194.1_PE2H4 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:139761-139950:- gene-YNCJ0004C_S288C rna-NR_132194.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000022.1:13663-13853:+ gene-YNCJ0004C_SA1 rna-NR_132194.1_SA1 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:130883-131072:- gene-YNCJ0004C_ThermosaccDry rna-NR_132194.1_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:137964-138154:- gene-YNCJ0004C_VR1 rna-NR_132194.1_VR1 Unknown 98.9 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:118326-118515:- gene-YNCJ0004C_ZTW1 rna-NR_132194.1_ZTW1 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:143437-143635:- gene-YNCJ0004C_Sparadoxus rna-NR_132194.1_Sparadoxus Unknown 91.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files