SNR19 (YNCN0005C)

Gene profile

Gene name: SNR19
Reference locus (S288C): YNCN0005C
Gene biotype: snRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005308.1:223886-224453:- gene-YNCN0005C_AKU4011 rna-NR_132250.1_AKU4011 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000155.1:127829-128396:- gene-YNCN0005C_BG1 rna-NR_132250.1_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005516.1:233933-234500:- gene-YNCN0005C_Bruggeman rna-NR_132250.1_Bruggeman Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005532.1:241089-241656:- gene-YNCN0005C_CAT1 rna-NR_132250.1_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005372.1:224283-224850:- gene-YNCN0005C_CBS1585 rna-NR_132250.1_CBS1585 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005356.1:219364-219931:- gene-YNCN0005C_CBS436 rna-NR_132250.1_CBS436 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005340.1:220317-220884:- gene-YNCN0005C_CBS6412 rna-NR_132250.1_CBS6412 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005324.1:220965-221532:- gene-YNCN0005C_CBS6413 rna-NR_132250.1_CBS6413 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001535.1:223908-224475:- gene-YNCN0005C_CENPK1137D rna-NR_132250.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005484.1:221521-222088:- gene-YNCN0005C_EthanolRed rna-NR_132250.1_EthanolRed Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005548.1:216263-216830:- gene-YNCN0005C_FaliES1 rna-NR_132250.1_FaliES1 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000082.1:127419-127986:- gene-YNCN0005C_JAY291 rna-NR_132250.1_JAY291 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005420.1:229469-230036:- gene-YNCN0005C_MUCL30387 rna-NR_132250.1_MUCL30387 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005452.1:228052-228619:- gene-YNCN0005C_MUCL30388 rna-NR_132250.1_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005292.1:221773-222340:- gene-YNCN0005C_MUCL39482 rna-NR_132250.1_MUCL39482 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005436.1:224027-224594:- gene-YNCN0005C_MUCL42920 rna-NR_132250.1_MUCL42920 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011823.1:230074-230641:- gene-YNCN0005C_NCIM3186 rna-NR_132250.1_NCIM3186 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005276.1:223865-224432:- gene-YNCN0005C_NCYC1407 rna-NR_132250.1_NCYC1407 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994153.1:220764-221331:- gene-YNCN0005C_PE2H3 rna-NR_132250.1_PE2H3 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999885.1:220152-220719:- gene-YNCN0005C_PE2H4 rna-NR_132250.1_PE2H4 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001146.8:230105-230672:- gene-YNCN0005C_S288C rna-NR_132250.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000040.1:21633-22200:+ gene-YNCN0005C_SA1 rna-NR_132250.1_SA1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005500.1:217119-217686:- gene-YNCN0005C_ThermosaccDry rna-NR_132250.1_ThermosaccDry Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005468.1:236120-236687:- gene-YNCN0005C_VR1 rna-NR_132250.1_VR1 Unknown 99.8 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000030.1:127451-128018:- gene-YNCN0005C_ZTW1 rna-NR_132250.1_ZTW1 Unknown 99.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047500.1:227525-228094:- gene-YNCN0005C_Sparadoxus rna-NR_132250.1_Sparadoxus Unknown 91.2 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files