SNR17A (YNCO0025W)

Gene profile

Gene name: SNR17A
Reference locus (S288C): YNCO0025W
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:770879-771368:+ gene-YNCO0025W_AKU4011 rna-NR_132262.1_AKU4011 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:172919-173408:+ gene-YNCO0025W_BG1 rna-NR_132262.1_BG1 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:756346-756835:+ gene-YNCO0025W_Bruggeman rna-NR_132262.1_Bruggeman Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:756996-757485:+ gene-YNCO0025W_CAT1 rna-NR_132262.1_CAT1 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:753868-754357:+ gene-YNCO0025W_CBS1585 rna-NR_132262.1_CBS1585 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005357.1:752563-753052:+ gene-YNCO0025W_CBS436 rna-NR_132262.1_CBS436 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:750987-751476:+ gene-YNCO0025W_CBS6412 rna-NR_132262.1_CBS6412 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:759627-760116:+ gene-YNCO0025W_CBS6413 rna-NR_132262.1_CBS6413 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:779869-780358:+ gene-YNCO0025W_CENPK1137D rna-NR_132262.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:746999-747488:+ gene-YNCO0025W_EthanolRed rna-NR_132262.1_EthanolRed Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:752398-752887:+ gene-YNCO0025W_FaliES1 rna-NR_132262.1_FaliES1 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000381.1:73950-74439:- gene-YNCO0025W_JAY291 rna-NR_132262.1_JAY291 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:760617-761106:+ gene-YNCO0025W_MUCL30387 rna-NR_132262.1_MUCL30387 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:767735-768224:+ gene-YNCO0025W_MUCL30388 rna-NR_132262.1_MUCL30388 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:761198-761687:+ gene-YNCO0025W_MUCL39482 rna-NR_132262.1_MUCL39482 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:770787-771276:+ gene-YNCO0025W_MUCL42920 rna-NR_132262.1_MUCL42920 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:779996-780485:+ gene-YNCO0025W_NCIM3186 rna-NR_132262.1_NCIM3186 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:761297-761786:+ gene-YNCO0025W_NCYC1407 rna-NR_132262.1_NCYC1407 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:760599-761088:+ gene-YNCO0025W_PE2H3 rna-NR_132262.1_PE2H3 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:770976-771465:+ gene-YNCO0025W_PE2H4 rna-NR_132262.1_PE2H4 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:780107-780596:+ gene-YNCO0025W_S288C rna-NR_132262.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000006.1:190100-190589:+ gene-YNCO0025W_SA1 rna-NR_132262.1_SA1 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:751581-752070:+ gene-YNCO0025W_ThermosaccDry rna-NR_132262.1_ThermosaccDry Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:815039-815528:+ gene-YNCO0025W_VR1 rna-NR_132262.1_VR1 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:484500-484989:+ gene-YNCO0025W_ZTW1 rna-NR_132262.1_ZTW1 Unknown 99.5 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:757500-757991:+ gene-YNCO0025W_Sparadoxus rna-NR_132262.1_Sparadoxus Unknown 90.9 99.3 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files