SNR161 (YNCB0009C)

Gene profile

Gene name: SNR161
Reference locus (S288C): YNCB0009C
Gene biotype: snoRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:289617-289777:- gene-YNCB0009C_AKU4011 rna-NR_132152.1_AKU4011 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:279756-279916:- gene-YNCB0009C_BG1 rna-NR_132152.1_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:290344-290504:- gene-YNCB0009C_Bruggeman rna-NR_132152.1_Bruggeman Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:294034-294194:- gene-YNCB0009C_CAT1 rna-NR_132152.1_CAT1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:281913-282073:- gene-YNCB0009C_CBS1585 rna-NR_132152.1_CBS1585 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005344.1:289920-290080:- gene-YNCB0009C_CBS436 rna-NR_132152.1_CBS436 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:379796-379956:- gene-YNCB0009C_CBS6412 rna-NR_132152.1_CBS6412 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:287029-287189:- gene-YNCB0009C_CBS6413 rna-NR_132152.1_CBS6413 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:300953-301113:- gene-YNCB0009C_CENPK1137D rna-NR_132152.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:416394-416554:- gene-YNCB0009C_EthanolRed rna-NR_132152.1_EthanolRed Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:305244-305404:- gene-YNCB0009C_FaliES1 rna-NR_132152.1_FaliES1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000441.1:26319-26479:+ gene-YNCB0009C_JAY291 rna-NR_132152.1_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:291946-292106:- gene-YNCB0009C_MUCL30387 rna-NR_132152.1_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:291749-291909:- gene-YNCB0009C_MUCL30388 rna-NR_132152.1_MUCL30388 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:281901-282061:- gene-YNCB0009C_MUCL39482 rna-NR_132152.1_MUCL39482 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:289095-289255:- gene-YNCB0009C_MUCL42920 rna-NR_132152.1_MUCL42920 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:306982-307142:- gene-YNCB0009C_NCIM3186 rna-NR_132152.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:282814-282974:- gene-YNCB0009C_NCYC1407 rna-NR_132152.1_NCYC1407 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:294984-295144:- gene-YNCB0009C_PE2H3 rna-NR_132152.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:292660-292820:- gene-YNCB0009C_PE2H4 rna-NR_132152.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:307185-307345:- gene-YNCB0009C_S288C rna-NR_132152.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000017.1:170202-170362:+ gene-YNCB0009C_SA1 rna-NR_132152.1_SA1 Unknown 99.3 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:304684-304844:- gene-YNCB0009C_ThermosaccDry rna-NR_132152.1_ThermosaccDry Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:286337-286497:- gene-YNCB0009C_VR1 rna-NR_132152.1_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:280410-280570:- gene-YNCB0009C_ZTW1 rna-NR_132152.1_ZTW1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:316645-316806:- gene-YNCB0009C_Sparadoxus rna-NR_132152.1_Sparadoxus Unknown 95.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files