SNO4 (YMR322C)


Gene profile

Gene name: SNO4
Reference locus (S288C): YMR322C
Gene biotype: protein_coding

Description: Probable glutathione-independent glyoxalase SNO4; Possible chaperone and cysteine protease; required for transcriptional reprogramming during the diauxic shift and for survival in stationary phase; similar to bacterial Hsp31 and yeast Hsp31p, Hsp32p, and Hsp33p; DJ-1/ThiJ/PfpI superfamily member; predicted involvement in pyridoxine metabolism; induced by mild heat stress and copper deprivation

Top 10 interactors (score): GLO1 (0.947); GLO4 (0.935); GLO2 (0.933); HSP32 (0.927); HSP33 (0.927); DLD3 (0.904); GRE2 (0.903); DLD1 (0.9); DLD2 (0.9); TRP5 (0.834); CHA1 (0.8); DSD1 (0.8); ILV1 (0.8); KEL3 (0.749); YGL258W-A (0.71); ECM10 (0.708); YMR320W (0.698); YOR381W-A (0.693); XDJ1 (0.692); HSP26 (0.677)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:1065051-1065764:- gene-YMR322C_AKU4011 rna-NM_001182835.1_AKU4011 cds-NP_014055.1_AKU4011 99.5 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:890645-891358:- gene-YMR322C_CBS1585 rna-NM_001182835.1_CBS1585 cds-NP_014055.1_CBS1585 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:1054734-1055447:- gene-YMR322C_CBS6413 rna-NM_001182835.1_CBS6413 cds-NP_014055.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:1045668-1046381:- gene-YMR322C_EthanolRed rna-NM_001182835.1_EthanolRed cds-NP_014055.1_EthanolRed 99.8 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:896624-897337:- gene-YMR322C_FaliES1 rna-NM_001182835.1_FaliES1 cds-NP_014055.1_FaliES1 99.8 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:891671-892384:- gene-YMR322C_MUCL39482 rna-NM_001182835.1_MUCL39482 cds-NP_014055.1_MUCL39482 99.7 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:891664-892377:- gene-YMR322C_NCYC1407 rna-NM_001182835.1_NCYC1407 cds-NP_014055.1_NCYC1407 99.5 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:914762-915475:- gene-YMR322C_PE2H4 rna-NM_001182835.1_PE2H4 cds-NP_014055.1_PE2H4 98.7 100.0 Mismatch 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:918366-919079:- gene-YMR322C_S288C rna-NM_001182835.1_S288C cds-NP_014055.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:893028-893741:- gene-YMR322C_ThermosaccDry rna-NM_001182835.1_ThermosaccDry cds-NP_014055.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:307211-307924:- gene-YMR322C_ZTW1 rna-NM_001182835.1_ZTW1 cds-NP_014055.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False

Additional files