Gene name: SNO3
Reference locus (S288C): YFL060C
Gene biotype: protein_coding
Description: Probable pyridoxal 5'-phosphate synthase subunit SNO3; Protein of unknown function; nearly identical to Sno2p; expression is induced before the diauxic shift and also in the absence of thiamin
Top 10 interactors (score): SNZ2 (0.999); SNZ3 (0.999); SNZ1 (0.997); SNO2 (0.959); SNO1 (0.948); PDX3 (0.851); BUD16 (0.826); BUD17 (0.826); RKI1 (0.812); RBK1 (0.803); THI5 (0.782); THI12 (0.724); FYV10 (0.669); THI13 (0.662); THI11 (0.659); YGR017W (0.65); NQM1 (0.638); TAL1 (0.638); SNO4 (0.615); PRS3 (0.602)
Homologues (species, bitscore): PDX2 (Arabidopsis thaliana, 103.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:428765-429256:+ | gene-YFL060C_CAT1 | rna-NM_001179907.1_CAT1 | cds-NP_116595.1_CAT1 | 72.4 | 73.5 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001527.1:6607-7275:- | gene-YFL060C_CENPK1137D | rna-NM_001179907.1_CENPK1137D | cds-NP_116595.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:2918-3586:- | gene-YFL060C_EthanolRed | rna-NM_001179907.1_EthanolRed | cds-NP_116595.1_EthanolRed | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:3434-4102:- | gene-YFL060C_FaliES1 | rna-NM_001179907.1_FaliES1 | cds-NP_116595.1_FaliES1 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000258.1:1-327:+ | gene-YFL060C_JAY291 | rna-NM_001179907.1_JAY291 | cds-NP_116595.1_JAY291 | 48.8 | 48.8 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:687669-688337:+ | gene-YFL060C_PE2H3 | rna-NM_001179907.1_PE2H3 | cds-NP_116595.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:1091516-1092184:+ | gene-YFL060C_PE2H4 | rna-NM_001179907.1_PE2H4 | cds-NP_116595.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:10301-10969:- | gene-YFL060C_S288C | rna-NM_001179907.1_S288C | cds-NP_116595.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000204.1:1-568:+ | gene-YFL060C_SA1 | rna-NM_001179907.1_SA1 | cds-NP_116595.1_SA1 | 84.0 | 84.9 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:4424-5092:- | gene-YFL060C_ThermosaccDry | rna-NM_001179907.1_ThermosaccDry | cds-NP_116595.1_ThermosaccDry | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005460.1:10597-11265:- | gene-YFL060C_VR1 | rna-NM_001179907.1_VR1 | cds-NP_116595.1_VR1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:726813-727481:+ | gene-YFL060C_Sparadoxus | rna-NM_001179907.1_Sparadoxus | cds-NP_116595.1_Sparadoxus | 87.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |