Gene name: SNO2
Reference locus (S288C): YNL334C
Gene biotype: protein_coding
Description: Probable pyridoxal 5'-phosphate synthase subunit SNO2; Protein of unknown function; nearly identical to Sno3p; expression is induced before the diauxic shift and also in the absence of thiamin; Belongs to the glutaminase PdxT/SNO family
Top 10 interactors (score): SNZ3 (0.999); SNZ2 (0.999); SNZ1 (0.996); SNO3 (0.959); SNO1 (0.948); THI13 (0.854); PDX3 (0.851); THI5 (0.837); BUD16 (0.826); BUD17 (0.826); RKI1 (0.812); RBK1 (0.803); THI20 (0.763); THI4 (0.705); THI12 (0.687); YGR017W (0.65); TAL1 (0.638); NQM1 (0.638); THI11 (0.637); FYV10 (0.634)
Homologues (species, bitscore): PDX2 (Arabidopsis thaliana, 103.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:5971-6639:- | gene-YNL334C_AKU4011 | rna-NM_001183172.1_AKU4011 | cds-NP_014065.1_AKU4011 | 98.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000105.1:3266-3934:- | gene-YNL334C_BG1 | rna-NM_001183172.1_BG1 | cds-NP_014065.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:13846-14514:- | gene-YNL334C_Bruggeman | rna-NM_001183172.1_Bruggeman | cds-NP_014065.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:14908-15570:- | gene-YNL334C_CAT1 | rna-NM_001183172.1_CAT1 | cds-NP_014065.1_CAT1 | 95.9 | 98.8 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:6824-7492:- | gene-YNL334C_CBS1585 | rna-NM_001183172.1_CBS1585 | cds-NP_014065.1_CBS1585 | 98.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:6821-7489:- | gene-YNL334C_CBS436 | rna-NM_001183172.1_CBS436 | cds-NP_014065.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:2862-3530:- | gene-YNL334C_CBS6412 | rna-NM_001183172.1_CBS6412 | cds-NP_014065.1_CBS6412 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:2989-3657:- | gene-YNL334C_CBS6413 | rna-NM_001183172.1_CBS6413 | cds-NP_014065.1_CBS6413 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000285.1:577-893:+ | gene-YNL334C_JAY291 | rna-NM_001183172.1_JAY291 | cds-NP_014065.1_JAY291 | 46.7 | 47.3 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005412.1:7196-7864:- | gene-YNL334C_MUCL30387 | rna-NM_001183172.1_MUCL30387 | cds-NP_014065.1_MUCL30387 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:8629-9297:- | gene-YNL334C_MUCL30388 | rna-NM_001183172.1_MUCL30388 | cds-NP_014065.1_MUCL30388 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:3605-4273:- | gene-YNL334C_MUCL39482 | rna-NM_001183172.1_MUCL39482 | cds-NP_014065.1_MUCL39482 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:5402-6070:- | gene-YNL334C_MUCL42920 | rna-NM_001183172.1_MUCL42920 | cds-NP_014065.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:6667-7335:- | gene-YNL334C_NCYC1407 | rna-NM_001183172.1_NCYC1407 | cds-NP_014065.1_NCYC1407 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:3958-4626:- | gene-YNL334C_1_PE2H3 | Unknown | Unknown | 100.0 | 100.0 | Verified | 2 | 2 | 1 | Unknown | Unknown | Unknown | Unknown | Unknown |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:724519-725187:+ | gene-YNL334C_PE2H3 | rna-NM_001183172.1_PE2H3 | cds-NP_014065.1_PE2H3 | 100.0 | 100.0 | Verified | 2 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:3958-4626:- | gene-YNL334C_1_PE2H4 | Unknown | Unknown | 100.0 | 100.0 | Verified | 2 | 2 | 1 | Unknown | Unknown | Unknown | Unknown | Unknown |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:718208-718876:+ | gene-YNL334C_PE2H4 | rna-NM_001183172.1_PE2H4 | cds-NP_014065.1_PE2H4 | 100.0 | 100.0 | Verified | 2 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:12208-12876:- | gene-YNL334C_S288C | rna-NM_001183172.1_S288C | cds-NP_014065.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000165.1:2183-2374:+ | gene-YNL334C_SA1 | rna-NM_001183172.1_SA1 | cds-NP_014065.1_SA1 | 28.1 | 28.6 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | MBVZ01000034.1:696-1364:+ | gene-YNL334C_VR1 | rna-NM_001183172.1_VR1 | cds-NP_014065.1_VR1 | 98.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:13977-14645:- | gene-YNL334C_Sparadoxus | rna-NM_001183172.1_Sparadoxus | cds-NP_014065.1_Sparadoxus | 88.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |