Gene name: SNA4
Reference locus (S288C): YDL123W
Gene biotype: protein_coding
Description: Protein of unknown function; localized to the vacuolar outer membrane; predicted to be palmitoylated
Top 10 interactors (score): PMP3 (0.851); YPL199C (0.821); MEH1 (0.8); PIB2 (0.797); ANR2 (0.771); AKR1 (0.76); ENV7 (0.758); PFA4 (0.746); LCB4 (0.746); YPQ2 (0.695); SWF1 (0.674); YCK2 (0.673); VMA13 (0.671); RSP5 (0.614); PFA3 (0.614); YCK3 (0.612); PFA5 (0.611); RCR1 (0.594); HNT1 (0.594); AKR2 (0.573)
Homologues (species, bitscore): ZK632.10 (Caenorhabditis elegans, 55.8); AT4G28088 (Arabidopsis thaliana, 50.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:226036-226458:+ | gene-YDL123W_AKU4011 | rna-NM_001180182.1_AKU4011 | cds-NP_010160.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:323487-323909:- | gene-YDL123W_BG1 | rna-NM_001180182.1_BG1 | cds-NP_010160.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:243183-243605:+ | gene-YDL123W_Bruggeman | rna-NM_001180182.1_Bruggeman | cds-NP_010160.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:240185-240607:+ | gene-YDL123W_CAT1 | rna-NM_001180182.1_CAT1 | cds-NP_010160.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:224297-224719:+ | gene-YDL123W_CBS1585 | rna-NM_001180182.1_CBS1585 | cds-NP_010160.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:240960-241382:+ | gene-YDL123W_CBS436 | rna-NM_001180182.1_CBS436 | cds-NP_010160.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:222722-223144:+ | gene-YDL123W_CBS6412 | rna-NM_001180182.1_CBS6412 | cds-NP_010160.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:242457-242879:+ | gene-YDL123W_CBS6413 | rna-NM_001180182.1_CBS6413 | cds-NP_010160.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:240190-240612:+ | gene-YDL123W_CENPK1137D | rna-NM_001180182.1_CENPK1137D | cds-NP_010160.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:237062-237484:+ | gene-YDL123W_EthanolRed | rna-NM_001180182.1_EthanolRed | cds-NP_010160.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:243032-243454:+ | gene-YDL123W_FaliES1 | rna-NM_001180182.1_FaliES1 | cds-NP_010160.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000010.1:13082-13504:+ | gene-YDL123W_JAY291 | rna-NM_001180182.1_JAY291 | cds-NP_010160.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:241238-241660:+ | gene-YDL123W_MUCL30387 | rna-NM_001180182.1_MUCL30387 | cds-NP_010160.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:231996-232418:+ | gene-YDL123W_MUCL30388 | rna-NM_001180182.1_MUCL30388 | cds-NP_010160.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:225401-225823:+ | gene-YDL123W_MUCL39482 | rna-NM_001180182.1_MUCL39482 | cds-NP_010160.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:147191-147613:+ | gene-YDL123W_MUCL42920 | rna-NM_001180182.1_MUCL42920 | cds-NP_010160.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:241341-241763:+ | gene-YDL123W_NCIM3186 | rna-NM_001180182.1_NCIM3186 | cds-NP_010160.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:225430-225852:+ | gene-YDL123W_NCYC1407 | rna-NM_001180182.1_NCYC1407 | cds-NP_010160.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:232186-232608:+ | gene-YDL123W_PE2H3 | rna-NM_001180182.1_PE2H3 | cds-NP_010160.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:232190-232612:+ | gene-YDL123W_PE2H4 | rna-NM_001180182.1_PE2H4 | cds-NP_010160.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:241418-241840:+ | gene-YDL123W_S288C | rna-NM_001180182.1_S288C | cds-NP_010160.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:193059-193481:- | gene-YDL123W_SA1 | rna-NM_001180182.1_SA1 | cds-NP_010160.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:242543-242965:+ | gene-YDL123W_ThermosaccDry | rna-NM_001180182.1_ThermosaccDry | cds-NP_010160.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:244648-245070:+ | gene-YDL123W_VR1 | rna-NM_001180182.1_VR1 | cds-NP_010160.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:240472-240894:+ | gene-YDL123W_ZTW1 | rna-NM_001180182.1_ZTW1 | cds-NP_010160.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:242604-243026:+ | gene-YDL123W_Sparadoxus | rna-NM_001180182.1_Sparadoxus | cds-NP_010160.1_Sparadoxus | 89.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |