Gene name: SNA2
Reference locus (S288C): YDR525W-A
Gene biotype: protein_coding
Description: Protein of unknown function; has similarity to Pmp3p, which is involved in cation transport; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; Belongs to the UPF0057 (PMP3) family
Top 10 interactors (score): SNA3 (0.999); PMP3 (0.859); TMS1 (0.749); YPQ2 (0.718); KXD1 (0.712); CNL1 (0.71); TVP38 (0.697); NCR1 (0.691); LDB18 (0.67); TDA5 (0.618); YGL199C (0.618); EOS1 (0.616); OCA2 (0.611); OR26.05 (0.6); GVP36 (0.574); YPQ1 (0.572); TED1 (0.572); RTC2 (0.568); PRC1 (0.551); STE13 (0.527)
Homologues (species, bitscore): ZK632.10 (Caenorhabditis elegans, 53.5); AT4G30650 (Arabidopsis thaliana, 55.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1430637-1430876:+ | gene-YDR525W-A_AKU4011 | rna-NM_001184329.1_AKU4011 | cds-NP_010814.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000073.1:72261-72500:+ | gene-YDR525W-A_BG1 | rna-NM_001184329.1_BG1 | cds-NP_010814.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1461930-1462169:+ | gene-YDR525W-A_Bruggeman | rna-NM_001184329.1_Bruggeman | cds-NP_010814.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1439101-1439340:+ | gene-YDR525W-A_CAT1 | rna-NM_001184329.1_CAT1 | cds-NP_010814.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1425365-1425604:+ | gene-YDR525W-A_CBS1585 | rna-NM_001184329.1_CBS1585 | cds-NP_010814.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1444570-1444809:+ | gene-YDR525W-A_CBS436 | rna-NM_001184329.1_CBS436 | cds-NP_010814.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1420528-1420767:+ | gene-YDR525W-A_CBS6412 | rna-NM_001184329.1_CBS6412 | cds-NP_010814.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1444025-1444264:+ | gene-YDR525W-A_CBS6413 | rna-NM_001184329.1_CBS6413 | cds-NP_010814.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1489279-1489518:+ | gene-YDR525W-A_CENPK1137D | rna-NM_001184329.1_CENPK1137D | cds-NP_010814.1_CENPK1137D | 98.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1433896-1434135:+ | gene-YDR525W-A_EthanolRed | rna-NM_001184329.1_EthanolRed | cds-NP_010814.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1437448-1437687:+ | gene-YDR525W-A_FaliES1 | rna-NM_001184329.1_FaliES1 | cds-NP_010814.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:135792-136031:+ | gene-YDR525W-A_JAY291 | rna-NM_001184329.1_JAY291 | cds-NP_010814.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1445023-1445262:+ | gene-YDR525W-A_MUCL30387 | rna-NM_001184329.1_MUCL30387 | cds-NP_010814.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1426466-1426705:+ | gene-YDR525W-A_MUCL30388 | rna-NM_001184329.1_MUCL30388 | cds-NP_010814.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1416862-1417101:+ | gene-YDR525W-A_MUCL39482 | rna-NM_001184329.1_MUCL39482 | cds-NP_010814.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1359498-1359737:+ | gene-YDR525W-A_MUCL42920 | rna-NM_001184329.1_MUCL42920 | cds-NP_010814.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1490519-1490758:+ | gene-YDR525W-A_NCIM3186 | rna-NM_001184329.1_NCIM3186 | cds-NP_010814.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1430155-1430394:+ | gene-YDR525W-A_NCYC1407 | rna-NM_001184329.1_NCYC1407 | cds-NP_010814.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1441060-1441299:+ | gene-YDR525W-A_PE2H3 | rna-NM_001184329.1_PE2H3 | cds-NP_010814.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1446528-1446767:+ | gene-YDR525W-A_PE2H4 | rna-NM_001184329.1_PE2H4 | cds-NP_010814.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1490596-1490835:+ | gene-YDR525W-A_S288C | rna-NM_001184329.1_S288C | cds-NP_010814.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:126269-126508:- | gene-YDR525W-A_SA1 | rna-NM_001184329.1_SA1 | cds-NP_010814.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1441670-1441909:+ | gene-YDR525W-A_ThermosaccDry | rna-NM_001184329.1_ThermosaccDry | cds-NP_010814.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1457451-1457690:+ | gene-YDR525W-A_VR1 | rna-NM_001184329.1_VR1 | cds-NP_010814.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:484330-484569:+ | gene-YDR525W-A_ZTW1 | rna-NM_001184329.1_ZTW1 | cds-NP_010814.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1450606-1450845:+ | gene-YDR525W-A_Sparadoxus | rna-NM_001184329.1_Sparadoxus | cds-NP_010814.1_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |