Gene name: SMY1
Reference locus (S288C): YKL079W
Gene biotype: protein_coding
Description: Kinesin-related protein SMY1; Kinesin-like myosin passenger-protein; interacts with Myo2p and enhances its interaction with Sec4p during transport of secretory vesicles; controls actin cable structure and dynamics
Top 10 interactors (score): MYO2 (0.999); TUB2 (0.985); SEC4 (0.968); DYN1 (0.947); BNR1 (0.947); TUB1 (0.919); TUB3 (0.919); PFY1 (0.899); SEC2 (0.886); MYO1 (0.879); ACT1 (0.859); BUD14 (0.846); GEM1 (0.835); MYO4 (0.82); TPM1 (0.818); MLC1 (0.814); BNI1 (0.797); BIM1 (0.781); TPM2 (0.774); CHS3 (0.744)
Homologues (species, bitscore): KIF5B (Homo sapiens, 147.9); Kif5b (Mus musculus, 147.9); kif5ba (Danio rerio, 150.6); kif5b (Xenopus tropicalis, 147.5); Khc (Drosophila melanogaster, 148.7); unc-116 (Caenorhabditis elegans, 149.8); AT3G63480 (Arabidopsis thaliana, 151.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:273161-275131:+ | gene-YKL079W_AKU4011 | rna-NM_001179645.1_AKU4011 | cds-NP_012844.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:250337-252303:+ | gene-YKL079W_BG1 | rna-NM_001179645.1_BG1 | cds-NP_012844.1_BG1 | 99.5 | 99.7 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:291326-293296:+ | gene-YKL079W_Bruggeman | rna-NM_001179645.1_Bruggeman | cds-NP_012844.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:286131-288101:+ | gene-YKL079W_CAT1 | rna-NM_001179645.1_CAT1 | cds-NP_012844.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:285402-287372:+ | gene-YKL079W_CBS1585 | rna-NM_001179645.1_CBS1585 | cds-NP_012844.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:283995-285965:+ | gene-YKL079W_CBS436 | rna-NM_001179645.1_CBS436 | cds-NP_012844.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:270029-271999:+ | gene-YKL079W_CBS6412 | rna-NM_001179645.1_CBS6412 | cds-NP_012844.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:285856-287826:+ | gene-YKL079W_CBS6413 | rna-NM_001179645.1_CBS6413 | cds-NP_012844.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:286246-288216:+ | gene-YKL079W_CENPK1137D | rna-NM_001179645.1_CENPK1137D | cds-NP_012844.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:283852-285822:+ | gene-YKL079W_EthanolRed | rna-NM_001179645.1_EthanolRed | cds-NP_012844.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:284664-286634:+ | gene-YKL079W_FaliES1 | rna-NM_001179645.1_FaliES1 | cds-NP_012844.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:106993-108963:+ | gene-YKL079W_JAY291 | rna-NM_001179645.1_JAY291 | cds-NP_012844.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:293127-295097:+ | gene-YKL079W_MUCL30387 | rna-NM_001179645.1_MUCL30387 | cds-NP_012844.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:287522-289492:+ | gene-YKL079W_MUCL30388 | rna-NM_001179645.1_MUCL30388 | cds-NP_012844.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:285187-287157:+ | gene-YKL079W_MUCL39482 | rna-NM_001179645.1_MUCL39482 | cds-NP_012844.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:289817-291786:+ | gene-YKL079W_MUCL42920 | rna-NM_001179645.1_MUCL42920 | cds-NP_012844.1_MUCL42920 | 99.8 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:286592-288562:+ | gene-YKL079W_NCIM3186 | rna-NM_001179645.1_NCIM3186 | cds-NP_012844.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:285382-287352:+ | gene-YKL079W_NCYC1407 | rna-NM_001179645.1_NCYC1407 | cds-NP_012844.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:292471-294441:+ | gene-YKL079W_PE2H3 | rna-NM_001179645.1_PE2H3 | cds-NP_012844.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:288758-290728:+ | gene-YKL079W_PE2H4 | rna-NM_001179645.1_PE2H4 | cds-NP_012844.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:286603-288573:+ | gene-YKL079W_S288C | rna-NM_001179645.1_S288C | cds-NP_012844.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:202731-204701:+ | gene-YKL079W_SA1 | rna-NM_001179645.1_SA1 | cds-NP_012844.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:285373-287343:+ | gene-YKL079W_ThermosaccDry | rna-NM_001179645.1_ThermosaccDry | cds-NP_012844.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:284731-286701:+ | gene-YKL079W_VR1 | rna-NM_001179645.1_VR1 | cds-NP_012844.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:283932-285902:+ | gene-YKL079W_ZTW1 | rna-NM_001179645.1_ZTW1 | cds-NP_012844.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:300997-302967:+ | gene-YKL079W_Sparadoxus | rna-NM_001179645.1_Sparadoxus | cds-NP_012844.1_Sparadoxus | 88.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |