Gene name: SMT1
Reference locus (S288C): YJL147C
Gene biotype: protein_coding
Description: MIOREX complex component 5; Protein that associates with mitochondrial ribosome; homozygous diploid deletion strain has a sporulation defect characterized by elevated dityrosine in the soluble fraction; expression induced by calcium shortage; YJL147W is a non-essential gene
Top 10 interactors (score): ATP22 (0.866); ATP23 (0.765); ATP6 (0.695); LAT1 (0.621); HSV2 (0.495); UTP13 (0.476); ATP12 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:129714-130862:- | gene-YJL147C_AKU4011 | rna-NM_001181580.1_AKU4011 | cds-NP_012388.1_AKU4011 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:482860-484008:+ | gene-YJL147C_BG1 | rna-NM_001181580.1_BG1 | cds-NP_012388.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:141549-142697:- | gene-YJL147C_Bruggeman | rna-NM_001181580.1_Bruggeman | cds-NP_012388.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:145332-146480:- | gene-YJL147C_CAT1 | rna-NM_001181580.1_CAT1 | cds-NP_012388.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:135347-136495:- | gene-YJL147C_CBS1585 | rna-NM_001181580.1_CBS1585 | cds-NP_012388.1_CBS1585 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:160099-161247:- | gene-YJL147C_CBS436 | rna-NM_001181580.1_CBS436 | cds-NP_012388.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:131756-132904:- | gene-YJL147C_CBS6412 | rna-NM_001181580.1_CBS6412 | cds-NP_012388.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:132820-133968:- | gene-YJL147C_CBS6413 | rna-NM_001181580.1_CBS6413 | cds-NP_012388.1_CBS6413 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:123807-124955:- | gene-YJL147C_CENPK1137D | rna-NM_001181580.1_CENPK1137D | cds-NP_012388.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:133872-135020:- | gene-YJL147C_EthanolRed | rna-NM_001181580.1_EthanolRed | cds-NP_012388.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:139350-140498:- | gene-YJL147C_FaliES1 | rna-NM_001181580.1_FaliES1 | cds-NP_012388.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000099.1:20527-21675:- | gene-YJL147C_JAY291 | rna-NM_001181580.1_JAY291 | cds-NP_012388.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:143818-144966:- | gene-YJL147C_MUCL30387 | rna-NM_001181580.1_MUCL30387 | cds-NP_012388.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:139870-141018:- | gene-YJL147C_MUCL30388 | rna-NM_001181580.1_MUCL30388 | cds-NP_012388.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:134089-135237:- | gene-YJL147C_MUCL39482 | rna-NM_001181580.1_MUCL39482 | cds-NP_012388.1_MUCL39482 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:139609-140757:- | gene-YJL147C_MUCL42920 | rna-NM_001181580.1_MUCL42920 | cds-NP_012388.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:141398-142546:- | gene-YJL147C_NCIM3186 | rna-NM_001181580.1_NCIM3186 | cds-NP_012388.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:132698-133846:- | gene-YJL147C_NCYC1407 | rna-NM_001181580.1_NCYC1407 | cds-NP_012388.1_NCYC1407 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:145505-146653:- | gene-YJL147C_PE2H3 | rna-NM_001181580.1_PE2H3 | cds-NP_012388.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:145147-146295:- | gene-YJL147C_PE2H4 | rna-NM_001181580.1_PE2H4 | cds-NP_012388.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:141419-142567:- | gene-YJL147C_S288C | rna-NM_001181580.1_S288C | cds-NP_012388.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:11047-12195:+ | gene-YJL147C_SA1 | rna-NM_001181580.1_SA1 | cds-NP_012388.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:132541-133689:- | gene-YJL147C_ThermosaccDry | rna-NM_001181580.1_ThermosaccDry | cds-NP_012388.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:139622-140770:- | gene-YJL147C_VR1 | rna-NM_001181580.1_VR1 | cds-NP_012388.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:119843-120980:- | gene-YJL147C_ZTW1 | rna-NM_001181580.1_ZTW1 | cds-NP_012388.1_ZTW1 | 95.8 | 98.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:145115-146263:- | gene-YJL147C_Sparadoxus | rna-NM_001181580.1_Sparadoxus | cds-NP_012388.1_Sparadoxus | 86.0 | 99.9 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |