Gene name: SML1
Reference locus (S288C): YML058W
Gene biotype: protein_coding
Description: Ribonucleotide reductase inhibitor; involved in regulating dNTP production; regulated by Mec1p and Rad53p during DNA damage and S phase; SML1 has a paralog, DIF1, that arose from the whole genome duplication
Top 10 interactors (score): RAD53 (0.996); MEC1 (0.993); DUN1 (0.992); RNR1 (0.985); MRC1 (0.937); DIF1 (0.911); RAD9 (0.907); LCD1 (0.905); RNR2 (0.899); TEL1 (0.897); RNR3 (0.836); CHK1 (0.827); WTM1 (0.81); PIF1 (0.774); RRM3 (0.767); HUG1 (0.749); RNR4 (0.745); MUB1 (0.74); IXR1 (0.717); RAD52 (0.714)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:153123-153437:+ | gene-YML058W_AKU4011 | rna-NM_001182417.1_AKU4011 | cds-NP_013653.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:322740-323054:- | gene-YML058W_BG1 | rna-NM_001182417.1_BG1 | cds-NP_013653.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:159258-159572:+ | gene-YML058W_Bruggeman | rna-NM_001182417.1_Bruggeman | cds-NP_013653.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:160923-161237:+ | gene-YML058W_CAT1 | rna-NM_001182417.1_CAT1 | cds-NP_013653.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:153134-153448:+ | gene-YML058W_CBS1585 | rna-NM_001182417.1_CBS1585 | cds-NP_013653.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:159019-159333:+ | gene-YML058W_CBS436 | rna-NM_001182417.1_CBS436 | cds-NP_013653.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:153842-154156:+ | gene-YML058W_CBS6412 | rna-NM_001182417.1_CBS6412 | cds-NP_013653.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:152316-152630:+ | gene-YML058W_CBS6413 | rna-NM_001182417.1_CBS6413 | cds-NP_013653.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:154098-154412:+ | gene-YML058W_CENPK1137D | rna-NM_001182417.1_CENPK1137D | cds-NP_013653.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:153397-153711:+ | gene-YML058W_EthanolRed | rna-NM_001182417.1_EthanolRed | cds-NP_013653.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:153902-154216:+ | gene-YML058W_FaliES1 | rna-NM_001182417.1_FaliES1 | cds-NP_013653.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000366.1:2911-3225:- | gene-YML058W_JAY291 | rna-NM_001182417.1_JAY291 | cds-NP_013653.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:157777-158091:+ | gene-YML058W_MUCL30387 | rna-NM_001182417.1_MUCL30387 | cds-NP_013653.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:160965-161279:+ | gene-YML058W_MUCL30388 | rna-NM_001182417.1_MUCL30388 | cds-NP_013653.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:153144-153458:+ | gene-YML058W_MUCL39482 | rna-NM_001182417.1_MUCL39482 | cds-NP_013653.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:158962-159276:+ | gene-YML058W_MUCL42920 | rna-NM_001182417.1_MUCL42920 | cds-NP_013653.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:159337-159651:+ | gene-YML058W_NCIM3186 | rna-NM_001182417.1_NCIM3186 | cds-NP_013653.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:153937-154251:+ | gene-YML058W_NCYC1407 | rna-NM_001182417.1_NCYC1407 | cds-NP_013653.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:159330-159644:+ | gene-YML058W_PE2H3 | rna-NM_001182417.1_PE2H3 | cds-NP_013653.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:159194-159508:+ | gene-YML058W_PE2H4 | rna-NM_001182417.1_PE2H4 | cds-NP_013653.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:159383-159697:+ | gene-YML058W_S288C | rna-NM_001182417.1_S288C | cds-NP_013653.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000041.1:24526-24840:- | gene-YML058W_SA1 | rna-NM_001182417.1_SA1 | cds-NP_013653.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:153195-153509:+ | gene-YML058W_ThermosaccDry | rna-NM_001182417.1_ThermosaccDry | cds-NP_013653.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:157543-157857:+ | gene-YML058W_VR1 | rna-NM_001182417.1_VR1 | cds-NP_013653.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:132728-133042:+ | gene-YML058W_ZTW1 | rna-NM_001182417.1_ZTW1 | cds-NP_013653.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:164340-164660:+ | gene-YML058W_Sparadoxus | rna-NM_001182417.1_Sparadoxus | cds-NP_013653.1_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |