Gene name: SMI1
Reference locus (S288C): YGR229C
Gene biotype: protein_coding
Description: Cell wall assembly regulator SMI1; Protein involved in the regulation of cell wall synthesis; proposed to be involved in coordinating cell cycle progression with cell wall integrity
Top 10 interactors (score): RLM1 (0.945); SLT2 (0.92); FKS1 (0.908); GAS1 (0.9); ROM2 (0.876); PKC1 (0.872); CHS3 (0.864); DRS2 (0.856); GSC2 (0.843); CNB1 (0.826); MID2 (0.821); BCK1 (0.808); TYS1 (0.792); RHO1 (0.788); CHS7 (0.788); SMK1 (0.786); KRE1 (0.78); SKT5 (0.768); BCK2 (0.758); ERV14 (0.757)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:914782-916299:- | gene-YGR229C_AKU4011 | rna-NM_001181358.1_AKU4011 | cds-NP_011745.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:194897-196414:- | gene-YGR229C_BG1 | rna-NM_001181358.1_BG1 | cds-NP_011745.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:922377-923894:- | gene-YGR229C_Bruggeman | rna-NM_001181358.1_Bruggeman | cds-NP_011745.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:921076-922593:- | gene-YGR229C_CAT1 | rna-NM_001181358.1_CAT1 | cds-NP_011745.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:917646-919163:- | gene-YGR229C_CBS1585 | rna-NM_001181358.1_CBS1585 | cds-NP_011745.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:921304-922821:- | gene-YGR229C_CBS436 | rna-NM_001181358.1_CBS436 | cds-NP_011745.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:908516-910033:- | gene-YGR229C_CBS6412 | rna-NM_001181358.1_CBS6412 | cds-NP_011745.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:914575-916092:- | gene-YGR229C_CBS6413 | rna-NM_001181358.1_CBS6413 | cds-NP_011745.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:948998-950515:- | gene-YGR229C_CENPK1137D | rna-NM_001181358.1_CENPK1137D | cds-NP_011745.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:902787-904301:- | gene-YGR229C_EthanolRed | rna-NM_001181358.1_EthanolRed | cds-NP_011745.1_EthanolRed | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:907422-908936:- | gene-YGR229C_FaliES1 | rna-NM_001181358.1_FaliES1 | cds-NP_011745.1_FaliES1 | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:121338-122855:+ | gene-YGR229C_JAY291 | rna-NM_001181358.1_JAY291 | cds-NP_011745.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:920292-921809:- | gene-YGR229C_MUCL30387 | rna-NM_001181358.1_MUCL30387 | cds-NP_011745.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:919547-921064:- | gene-YGR229C_MUCL30388 | rna-NM_001181358.1_MUCL30388 | cds-NP_011745.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:912721-914238:- | gene-YGR229C_MUCL39482 | rna-NM_001181358.1_MUCL39482 | cds-NP_011745.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:931270-932787:- | gene-YGR229C_MUCL42920 | rna-NM_001181358.1_MUCL42920 | cds-NP_011745.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:949382-950899:- | gene-YGR229C_NCIM3186 | rna-NM_001181358.1_NCIM3186 | cds-NP_011745.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:908377-909894:- | gene-YGR229C_NCYC1407 | rna-NM_001181358.1_NCYC1407 | cds-NP_011745.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:933575-935092:- | gene-YGR229C_PE2H3 | rna-NM_001181358.1_PE2H3 | cds-NP_011745.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:938414-939931:- | gene-YGR229C_PE2H4 | rna-NM_001181358.1_PE2H4 | cds-NP_011745.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:949382-950899:- | gene-YGR229C_S288C | rna-NM_001181358.1_S288C | cds-NP_011745.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000045.1:50594-52111:+ | gene-YGR229C_SA1 | rna-NM_001181358.1_SA1 | cds-NP_011745.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:927933-929447:- | gene-YGR229C_ThermosaccDry | rna-NM_001181358.1_ThermosaccDry | cds-NP_011745.1_ThermosaccDry | 99.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1032721-1034238:- | gene-YGR229C_VR1 | rna-NM_001181358.1_VR1 | cds-NP_011745.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:229362-230879:- | gene-YGR229C_ZTW1 | rna-NM_001181358.1_ZTW1 | cds-NP_011745.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:920073-921602:- | gene-YGR229C_Sparadoxus | rna-NM_001181358.1_Sparadoxus | cds-NP_011745.1_Sparadoxus | 87.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |