Gene name: SMF2
Reference locus (S288C): YHR050W
Gene biotype: protein_coding
Description: Divalent metal ion transporter involved in manganese homeostasis; has broad specificity for di-valent and tri-valent metals; post-translationally regulated by levels of metal ions; member of the Nramp family of metal transport proteins
Top 10 interactors (score): MTM1 (0.93); SOD2 (0.924); BSD2 (0.902); SMX3 (0.865); PMR1 (0.845); CCC1 (0.805); FET4 (0.804); YPK9 (0.803); CDC1 (0.777); PHO84 (0.776); GDT1 (0.719); FET3 (0.689); PPN1 (0.671); VTC4 (0.671); FTR1 (0.659); SPF1 (0.644); CTR2 (0.643); PCA1 (0.616); AFT1 (0.596); CTR3 (0.589)
Homologues (species, bitscore): SLC11A2 (Homo sapiens, 190.3); Slc11a2 (Mus musculus, 190.3); slc11a2 (Danio rerio, 57.4); slc11a2 (Xenopus tropicalis, 191.8); Mvl (Drosophila melanogaster, 178.7); smf-1 (Caenorhabditis elegans, 177.9); NRAMP1 (Arabidopsis thaliana, 234.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:195916-197565:+ | gene-YHR050W_AKU4011 | rna-NM_001179180.1_AKU4011 | cds-NP_011917.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:116172-117821:+ | gene-YHR050W_BG1 | rna-NM_001179180.1_BG1 | cds-NP_011917.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:203669-205318:+ | gene-YHR050W_Bruggeman | rna-NM_001179180.1_Bruggeman | cds-NP_011917.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:198463-200112:+ | gene-YHR050W_CAT1 | rna-NM_001179180.1_CAT1 | cds-NP_011917.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:195022-196671:+ | gene-YHR050W_CBS1585 | rna-NM_001179180.1_CBS1585 | cds-NP_011917.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:190530-192179:+ | gene-YHR050W_CBS436 | rna-NM_001179180.1_CBS436 | cds-NP_011917.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:195254-196903:+ | gene-YHR050W_CBS6412 | rna-NM_001179180.1_CBS6412 | cds-NP_011917.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:196087-197736:+ | gene-YHR050W_CBS6413 | rna-NM_001179180.1_CBS6413 | cds-NP_011917.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:200915-202564:+ | gene-YHR050W_CENPK1137D | rna-NM_001179180.1_CENPK1137D | cds-NP_011917.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:195414-197063:+ | gene-YHR050W_EthanolRed | rna-NM_001179180.1_EthanolRed | cds-NP_011917.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:196391-198040:+ | gene-YHR050W_FaliES1 | rna-NM_001179180.1_FaliES1 | cds-NP_011917.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000244.1:13143-14792:+ | gene-YHR050W_JAY291 | rna-NM_001179180.1_JAY291 | cds-NP_011917.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:203128-204777:+ | gene-YHR050W_MUCL30387 | rna-NM_001179180.1_MUCL30387 | cds-NP_011917.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:203303-204952:+ | gene-YHR050W_MUCL30388 | rna-NM_001179180.1_MUCL30388 | cds-NP_011917.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:195307-196956:+ | gene-YHR050W_MUCL39482 | rna-NM_001179180.1_MUCL39482 | cds-NP_011917.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:202212-203861:+ | gene-YHR050W_MUCL42920 | rna-NM_001179180.1_MUCL42920 | cds-NP_011917.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:207536-209185:+ | gene-YHR050W_NCIM3186 | rna-NM_001179180.1_NCIM3186 | cds-NP_011917.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:195322-196971:+ | gene-YHR050W_NCYC1407 | rna-NM_001179180.1_NCYC1407 | cds-NP_011917.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:197510-199159:+ | gene-YHR050W_PE2H3 | rna-NM_001179180.1_PE2H3 | cds-NP_011917.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:204957-206606:+ | gene-YHR050W_PE2H4 | rna-NM_001179180.1_PE2H4 | cds-NP_011917.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:207654-209303:+ | gene-YHR050W_S288C | rna-NM_001179180.1_S288C | cds-NP_011917.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:149291-150940:- | gene-YHR050W_SA1 | rna-NM_001179180.1_SA1 | cds-NP_011917.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:197482-199131:+ | gene-YHR050W_ThermosaccDry | rna-NM_001179180.1_ThermosaccDry | cds-NP_011917.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:204014-205663:+ | gene-YHR050W_VR1 | rna-NM_001179180.1_VR1 | cds-NP_011917.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:189027-190676:+ | gene-YHR050W_ZTW1 | rna-NM_001179180.1_ZTW1 | cds-NP_011917.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:194595-196247:+ | gene-YHR050W_Sparadoxus | rna-NM_001179180.1_Sparadoxus | cds-NP_011917.1_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |