SMA1 (YPL027W)

Gene profile

Gene name: SMA1
Reference locus (S288C): YPL027W
Gene biotype: protein_coding

Description: Protein of unknown function involved in prospore membrane assembly; involved in the assembly of the prospore membrane during sporulation; interacts with Spo14p

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:471157-471894:+ gene-YPL027W_AKU4011 rna-NM_001183841.1_AKU4011 cds-NP_015298.1_AKU4011 99.8 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000091.1:425474-426223:- gene-YPL027W_BG1 rna-NM_001183841.1_BG1 cds-NP_015298.1_BG1 96.9 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:548117-548854:+ gene-YPL027W_Bruggeman rna-NM_001183841.1_Bruggeman cds-NP_015298.1_Bruggeman 98.9 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:587798-588547:+ gene-YPL027W_CAT1 rna-NM_001183841.1_CAT1 cds-NP_015298.1_CAT1 96.9 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:475227-475964:+ gene-YPL027W_CBS1585 rna-NM_001183841.1_CBS1585 cds-NP_015298.1_CBS1585 99.8 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:489365-490114:+ gene-YPL027W_CBS436 rna-NM_001183841.1_CBS436 cds-NP_015298.1_CBS436 97.2 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:479419-480156:+ gene-YPL027W_CBS6412 rna-NM_001183841.1_CBS6412 cds-NP_015298.1_CBS6412 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:471779-472516:+ gene-YPL027W_CBS6413 rna-NM_001183841.1_CBS6413 cds-NP_015298.1_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:499633-500370:+ gene-YPL027W_CENPK1137D rna-NM_001183841.1_CENPK1137D cds-NP_015298.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:469517-470254:+ gene-YPL027W_EthanolRed rna-NM_001183841.1_EthanolRed cds-NP_015298.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:477347-478084:+ gene-YPL027W_FaliES1 rna-NM_001183841.1_FaliES1 cds-NP_015298.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000283.1:85955-86704:+ gene-YPL027W_JAY291 rna-NM_001183841.1_JAY291 cds-NP_015298.1_JAY291 96.9 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:489066-489803:+ gene-YPL027W_MUCL30387 rna-NM_001183841.1_MUCL30387 cds-NP_015298.1_MUCL30387 99.1 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:488174-488911:+ gene-YPL027W_MUCL30388 rna-NM_001183841.1_MUCL30388 cds-NP_015298.1_MUCL30388 98.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:468543-469280:+ gene-YPL027W_MUCL39482 rna-NM_001183841.1_MUCL39482 cds-NP_015298.1_MUCL39482 99.8 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:527687-528424:+ gene-YPL027W_MUCL42920 rna-NM_001183841.1_MUCL42920 cds-NP_015298.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:499648-500385:+ gene-YPL027W_NCIM3186 rna-NM_001183841.1_NCIM3186 cds-NP_015298.1_NCIM3186 98.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:475821-476558:+ gene-YPL027W_NCYC1407 rna-NM_001183841.1_NCYC1407 cds-NP_015298.1_NCYC1407 99.8 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:482467-483216:+ gene-YPL027W_PE2H3 rna-NM_001183841.1_PE2H3 cds-NP_015298.1_PE2H3 96.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:482082-482831:+ gene-YPL027W_PE2H4 rna-NM_001183841.1_PE2H4 cds-NP_015298.1_PE2H4 96.9 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:499665-500402:+ gene-YPL027W_S288C rna-NM_001183841.1_S288C cds-NP_015298.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000029.1:42523-43272:+ gene-YPL027W_SA1 rna-NM_001183841.1_SA1 cds-NP_015298.1_SA1 96.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:477146-477883:+ gene-YPL027W_ThermosaccDry rna-NM_001183841.1_ThermosaccDry cds-NP_015298.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:492045-492794:+ gene-YPL027W_VR1 rna-NM_001183841.1_VR1 cds-NP_015298.1_VR1 97.2 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:476438-477175:+ gene-YPL027W_ZTW1 rna-NM_001183841.1_ZTW1 cds-NP_015298.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:476415-477155:+ gene-YPL027W_Sparadoxus rna-NM_001183841.1_Sparadoxus cds-NP_015298.1_Sparadoxus 86.7 100.0 Verified 1 1 1 False True False False False

Additional files