Gene name: SLZ1
Reference locus (S288C): YNL196C
Gene biotype: protein_coding
Description: Sporulation-specific protein with a leucine zipper motif; subunit of the MIS complex which controls mRNA methylation during during the induction of sporulation
Top 10 interactors (score): IME4 (0.968); MUM2 (0.963); MPC54 (0.746); PHO92 (0.727); YOL131W (0.68); ADY3 (0.68); YKR005C (0.674); IME1 (0.671); REC102 (0.671); YPR174C (0.654); YBR184W (0.619); BSC4 (0.574); MEI5 (0.57); IRC5 (0.568); MBR1 (0.562); NDT80 (0.553); GMC2 (0.527); KEG1 (0.526); ICS2 (0.525); ECM11 (0.515)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:264056-264949:- | gene-YNL196C_AKU4011 | rna-NM_001183034.1_AKU4011 | cds-NP_014203.1_AKU4011 | 98.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:168000-168896:- | gene-YNL196C_BG1 | rna-NM_001183034.1_BG1 | cds-NP_014203.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:274101-274997:- | gene-YNL196C_Bruggeman | rna-NM_001183034.1_Bruggeman | cds-NP_014203.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:316343-317239:- | gene-YNL196C_CAT1 | rna-NM_001183034.1_CAT1 | cds-NP_014203.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:264701-265594:- | gene-YNL196C_CBS1585 | rna-NM_001183034.1_CBS1585 | cds-NP_014203.1_CBS1585 | 98.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:332986-333882:- | gene-YNL196C_CBS436 | rna-NM_001183034.1_CBS436 | cds-NP_014203.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:260113-261006:- | gene-YNL196C_CBS6412 | rna-NM_001183034.1_CBS6412 | cds-NP_014203.1_CBS6412 | 98.7 | 99.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:261135-262028:- | gene-YNL196C_CBS6413 | rna-NM_001183034.1_CBS6413 | cds-NP_014203.1_CBS6413 | 98.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:264123-265019:- | gene-YNL196C_CENPK1137D | rna-NM_001183034.1_CENPK1137D | cds-NP_014203.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:261033-261926:- | gene-YNL196C_EthanolRed | rna-NM_001183034.1_EthanolRed | cds-NP_014203.1_EthanolRed | 98.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:256946-257839:- | gene-YNL196C_FaliES1 | rna-NM_001183034.1_FaliES1 | cds-NP_014203.1_FaliES1 | 98.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000260.1:60536-61433:+ | gene-YNL196C_JAY291 | rna-NM_001183034.1_JAY291 | cds-NP_014203.1_JAY291 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:269897-270790:- | gene-YNL196C_MUCL30387 | rna-NM_001183034.1_MUCL30387 | cds-NP_014203.1_MUCL30387 | 98.9 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:304254-305150:- | gene-YNL196C_MUCL30388 | rna-NM_001183034.1_MUCL30388 | cds-NP_014203.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:261940-262833:- | gene-YNL196C_MUCL39482 | rna-NM_001183034.1_MUCL39482 | cds-NP_014203.1_MUCL39482 | 98.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:264304-265200:- | gene-YNL196C_MUCL42920 | rna-NM_001183034.1_MUCL42920 | cds-NP_014203.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:270244-271140:- | gene-YNL196C_NCIM3186 | rna-NM_001183034.1_NCIM3186 | cds-NP_014203.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:264035-264928:- | gene-YNL196C_NCYC1407 | rna-NM_001183034.1_NCYC1407 | cds-NP_014203.1_NCYC1407 | 98.6 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:260939-261835:- | gene-YNL196C_PE2H3 | rna-NM_001183034.1_PE2H3 | cds-NP_014203.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:260327-261223:- | gene-YNL196C_PE2H4 | rna-NM_001183034.1_PE2H4 | cds-NP_014203.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:270275-271171:- | gene-YNL196C_S288C | rna-NM_001183034.1_S288C | cds-NP_014203.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:142426-143322:+ | gene-YNL196C_SA1 | rna-NM_001183034.1_SA1 | cds-NP_014203.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:257803-258696:- | gene-YNL196C_ThermosaccDry | rna-NM_001183034.1_ThermosaccDry | cds-NP_014203.1_ThermosaccDry | 98.7 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:276291-277187:- | gene-YNL196C_VR1 | rna-NM_001183034.1_VR1 | cds-NP_014203.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:167632-168524:- | gene-YNL196C_ZTW1 | rna-NM_001183034.1_ZTW1 | cds-NP_014203.1_ZTW1 | 98.6 | 99.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:268143-269039:- | gene-YNL196C_Sparadoxus | rna-NM_001183034.1_Sparadoxus | cds-NP_014203.1_Sparadoxus | 83.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |