Gene name: SLY41
Reference locus (S288C): YOR307C
Gene biotype: protein_coding
Description: Solute carrier family 35, member e1; Uncharacterized transporter SLY41; Protein involved in ER-to-Golgi transport
Top 10 interactors (score): YMD8 (0.803); YPT1 (0.783); YEA4 (0.764); SEC22 (0.764); YAR028W (0.749); USO1 (0.721); YEL074W (0.711); ENV10 (0.709); SSP120 (0.695); SLY1 (0.679); NUP84 (0.677); PMT7 (0.673); YOR302W (0.672); SEC21 (0.671); MST28 (0.658); TPO5 (0.621); UIP3 (0.597); YET3 (0.597); LEU5 (0.579); YCR007C (0.572)
Homologues (species, bitscore): SLC35E1 (Homo sapiens, 90.1); Slc35e1 (Mus musculus, 87.4); slc35e1 (Danio rerio, 84.0); slc35e1 (Xenopus tropicalis, 52.4); CG14621 (Drosophila melanogaster, 79.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:883208-884569:- | gene-YOR307C_AKU4011 | rna-NM_001183727.1_AKU4011 | cds-NP_014952.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:285225-286586:- | gene-YOR307C_BG1 | rna-NM_001183727.1_BG1 | cds-NP_014952.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:868625-869986:- | gene-YOR307C_Bruggeman | rna-NM_001183727.1_Bruggeman | cds-NP_014952.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:869343-870704:- | gene-YOR307C_CAT1 | rna-NM_001183727.1_CAT1 | cds-NP_014952.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:867019-868380:- | gene-YOR307C_CBS1585 | rna-NM_001183727.1_CBS1585 | cds-NP_014952.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:864863-866224:- | gene-YOR307C_CBS436 | rna-NM_001183727.1_CBS436 | cds-NP_014952.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:862736-864097:- | gene-YOR307C_CBS6412 | rna-NM_001183727.1_CBS6412 | cds-NP_014952.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:871864-873225:- | gene-YOR307C_CBS6413 | rna-NM_001183727.1_CBS6413 | cds-NP_014952.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:892509-893870:- | gene-YOR307C_CENPK1137D | rna-NM_001183727.1_CENPK1137D | cds-NP_014952.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:859117-860478:- | gene-YOR307C_EthanolRed | rna-NM_001183727.1_EthanolRed | cds-NP_014952.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:864740-866101:- | gene-YOR307C_FaliES1 | rna-NM_001183727.1_FaliES1 | cds-NP_014952.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000078.1:137150-138511:+ | gene-YOR307C_JAY291 | rna-NM_001183727.1_JAY291 | cds-NP_014952.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:872868-874229:- | gene-YOR307C_MUCL30387 | rna-NM_001183727.1_MUCL30387 | cds-NP_014952.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:880871-882232:- | gene-YOR307C_MUCL30388 | rna-NM_001183727.1_MUCL30388 | cds-NP_014952.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:873564-874925:- | gene-YOR307C_MUCL39482 | rna-NM_001183727.1_MUCL39482 | cds-NP_014952.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:883051-884412:- | gene-YOR307C_MUCL42920 | rna-NM_001183727.1_MUCL42920 | cds-NP_014952.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:892620-893981:- | gene-YOR307C_NCIM3186 | rna-NM_001183727.1_NCIM3186 | cds-NP_014952.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:874565-875926:- | gene-YOR307C_NCYC1407 | rna-NM_001183727.1_NCYC1407 | cds-NP_014952.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:872805-874166:- | gene-YOR307C_PE2H3 | rna-NM_001183727.1_PE2H3 | cds-NP_014952.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:889157-890518:- | gene-YOR307C_PE2H4 | rna-NM_001183727.1_PE2H4 | cds-NP_014952.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:892731-894092:- | gene-YOR307C_S288C | rna-NM_001183727.1_S288C | cds-NP_014952.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000016.1:3056-4417:- | gene-YOR307C_SA1 | rna-NM_001183727.1_SA1 | cds-NP_014952.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:863923-865284:- | gene-YOR307C_ThermosaccDry | rna-NM_001183727.1_ThermosaccDry | cds-NP_014952.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:927227-928588:- | gene-YOR307C_VR1 | rna-NM_001183727.1_VR1 | cds-NP_014952.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:596801-598162:- | gene-YOR307C_ZTW1 | rna-NM_001183727.1_ZTW1 | cds-NP_014952.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:870978-872336:- | gene-YOR307C_Sparadoxus | rna-NM_001183727.1_Sparadoxus | cds-NP_014952.1_Sparadoxus | 89.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |