Gene name: SLP1
Reference locus (S288C): YOR154W
Gene biotype: protein_coding
Description: Uncharacterized protein SLP1; Glycosylated integral ER membrane protein of unknown function; forms an ER-membrane associated protein complex with Emp65p; member of the SUN-like family of proteins; genetic interactions suggest a role in folding of ER membrane proteins; required for nuclear envelope localization of Mps3p
Top 10 interactors (score): EMP65 (0.845); YNL050C (0.814); YFR012W-A (0.766); DCV1 (0.766); HGH1 (0.765); YLR287C (0.76); YCR016W (0.747); YGR146C-A (0.747); TMA16 (0.729); NAT2 (0.712); SPO77 (0.691); SBE22 (0.679); CMR3 (0.678); MRX12 (0.618); RRT14 (0.615); FCF2 (0.611); TSR4 (0.593); EFM2 (0.588); SFM1 (0.587); SPP2 (0.574)
Homologues (species, bitscore): SUCO (Homo sapiens, 161.8); Suco (Mus musculus, 154.1); suco (Danio rerio, 147.1); suco (Xenopus tropicalis, 160.2); CG31678 (Drosophila melanogaster, 131.0); R12E2.2 (Caenorhabditis elegans, 122.9); AT1G22882 (Arabidopsis thaliana, 138.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:622350-624116:+ | gene-YOR154W_AKU4011 | rna-NM_001183573.1_AKU4011 | cds-NP_014797.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:24103-25866:+ | gene-YOR154W_BG1 | rna-NM_001183573.1_BG1 | cds-NP_014797.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:606420-608183:+ | gene-YOR154W_Bruggeman | rna-NM_001183573.1_Bruggeman | cds-NP_014797.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:606438-608201:+ | gene-YOR154W_CAT1 | rna-NM_001183573.1_CAT1 | cds-NP_014797.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:604851-606617:+ | gene-YOR154W_CBS1585 | rna-NM_001183573.1_CBS1585 | cds-NP_014797.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:603142-604905:+ | gene-YOR154W_CBS436 | rna-NM_001183573.1_CBS436 | cds-NP_014797.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:602463-604229:+ | gene-YOR154W_CBS6412 | rna-NM_001183573.1_CBS6412 | cds-NP_014797.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:611138-612904:+ | gene-YOR154W_CBS6413 | rna-NM_001183573.1_CBS6413 | cds-NP_014797.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:624485-626248:+ | gene-YOR154W_CENPK1137D | rna-NM_001183573.1_CENPK1137D | cds-NP_014797.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:598562-600328:+ | gene-YOR154W_EthanolRed | rna-NM_001183573.1_EthanolRed | cds-NP_014797.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:603415-605181:+ | gene-YOR154W_FaliES1 | rna-NM_001183573.1_FaliES1 | cds-NP_014797.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000070.1:38366-40129:- | gene-YOR154W_JAY291 | rna-NM_001183573.1_JAY291 | cds-NP_014797.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:611227-612990:+ | gene-YOR154W_MUCL30387 | rna-NM_001183573.1_MUCL30387 | cds-NP_014797.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:617984-619747:+ | gene-YOR154W_MUCL30388 | rna-NM_001183573.1_MUCL30388 | cds-NP_014797.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:612692-614458:+ | gene-YOR154W_MUCL39482 | rna-NM_001183573.1_MUCL39482 | cds-NP_014797.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:622110-623873:+ | gene-YOR154W_MUCL42920 | rna-NM_001183573.1_MUCL42920 | cds-NP_014797.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:624618-626381:+ | gene-YOR154W_NCIM3186 | rna-NM_001183573.1_NCIM3186 | cds-NP_014797.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:612778-614544:+ | gene-YOR154W_NCYC1407 | rna-NM_001183573.1_NCYC1407 | cds-NP_014797.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:611283-613046:+ | gene-YOR154W_PE2H3 | rna-NM_001183573.1_PE2H3 | cds-NP_014797.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:621660-623423:+ | gene-YOR154W_PE2H4 | rna-NM_001183573.1_PE2H4 | cds-NP_014797.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:624729-626492:+ | gene-YOR154W_S288C | rna-NM_001183573.1_S288C | cds-NP_014797.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:41269-43032:+ | gene-YOR154W_SA1 | rna-NM_001183573.1_SA1 | cds-NP_014797.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:602598-604364:+ | gene-YOR154W_ThermosaccDry | rna-NM_001183573.1_ThermosaccDry | cds-NP_014797.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:666283-668046:+ | gene-YOR154W_VR1 | rna-NM_001183573.1_VR1 | cds-NP_014797.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:336050-337813:+ | gene-YOR154W_ZTW1 | rna-NM_001183573.1_ZTW1 | cds-NP_014797.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:607717-609477:+ | gene-YOR154W_Sparadoxus | rna-NM_001183573.1_Sparadoxus | cds-NP_014797.1_Sparadoxus | 87.9 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |