Gene name: SLK19
Reference locus (S288C): YOR195W
Gene biotype: protein_coding
Description: Kinetochore-associated protein; required for chromosome segregation and kinetochore clustering; required for normal segregation of chromosomes in meiosis and mitosis; component of the FEAR regulatory network, which promotes Cdc14p release from the nucleolus during anaphase; potential Cdc28p substrate
Top 10 interactors (score): ESP1 (0.998); CDC55 (0.971); CDC14 (0.97); CIN8 (0.963); SPO12 (0.944); PDS1 (0.944); LTE1 (0.939); MAD2 (0.925); CDC5 (0.918); KAR3 (0.913); BIM1 (0.899); CLB2 (0.888); NET1 (0.868); STU2 (0.86); CDC15 (0.839); TPD3 (0.836); MAD1 (0.832); KIP3 (0.828); PPH21 (0.814); PPH22 (0.808)
Homologues (species, bitscore): LAMA2 (Homo sapiens, 53.1); lama5 (Danio rerio, 55.8); lama5 (Xenopus tropicalis, 60.5); dyf-14 (Caenorhabditis elegans, 55.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:703651-706116:+ | gene-YOR195W_AKU4011 | rna-NM_001183614.3_AKU4011 | cds-NP_014838.3_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:105691-108156:+ | gene-YOR195W_BG1 | rna-NM_001183614.3_BG1 | cds-NP_014838.3_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:688482-690947:+ | gene-YOR195W_Bruggeman | rna-NM_001183614.3_Bruggeman | cds-NP_014838.3_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:689765-692230:+ | gene-YOR195W_CAT1 | rna-NM_001183614.3_CAT1 | cds-NP_014838.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:686638-689103:+ | gene-YOR195W_CBS1585 | rna-NM_001183614.3_CBS1585 | cds-NP_014838.3_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:685328-687793:+ | gene-YOR195W_CBS436 | rna-NM_001183614.3_CBS436 | cds-NP_014838.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:683756-686221:+ | gene-YOR195W_CBS6412 | rna-NM_001183614.3_CBS6412 | cds-NP_014838.3_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:692395-694860:+ | gene-YOR195W_CBS6413 | rna-NM_001183614.3_CBS6413 | cds-NP_014838.3_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:712621-715086:+ | gene-YOR195W_CENPK1137D | rna-NM_001183614.3_CENPK1137D | cds-NP_014838.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:679781-682246:+ | gene-YOR195W_EthanolRed | rna-NM_001183614.3_EthanolRed | cds-NP_014838.3_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:685178-687643:+ | gene-YOR195W_FaliES1 | rna-NM_001183614.3_FaliES1 | cds-NP_014838.3_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:139104-141569:- | gene-YOR195W_JAY291 | rna-NM_001183614.3_JAY291 | cds-NP_014838.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:692448-694913:+ | gene-YOR195W_MUCL30387 | rna-NM_001183614.3_MUCL30387 | cds-NP_014838.3_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:699866-702331:+ | gene-YOR195W_MUCL30388 | rna-NM_001183614.3_MUCL30388 | cds-NP_014838.3_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:693967-696432:+ | gene-YOR195W_MUCL39482 | rna-NM_001183614.3_MUCL39482 | cds-NP_014838.3_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:703551-706016:+ | gene-YOR195W_MUCL42920 | rna-NM_001183614.3_MUCL42920 | cds-NP_014838.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:712755-715220:+ | gene-YOR195W_NCIM3186 | rna-NM_001183614.3_NCIM3186 | cds-NP_014838.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:694065-696530:+ | gene-YOR195W_NCYC1407 | rna-NM_001183614.3_NCYC1407 | cds-NP_014838.3_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:693464-695929:+ | gene-YOR195W_PE2H3 | rna-NM_001183614.3_PE2H3 | cds-NP_014838.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:703841-706306:+ | gene-YOR195W_PE2H4 | rna-NM_001183614.3_PE2H4 | cds-NP_014838.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:712866-715331:+ | gene-YOR195W_S288C | rna-NM_001183614.3_S288C | cds-NP_014838.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:122871-125336:+ | gene-YOR195W_SA1 | rna-NM_001183614.3_SA1 | cds-NP_014838.3_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:684363-686828:+ | gene-YOR195W_ThermosaccDry | rna-NM_001183614.3_ThermosaccDry | cds-NP_014838.3_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:747904-750369:+ | gene-YOR195W_VR1 | rna-NM_001183614.3_VR1 | cds-NP_014838.3_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:417279-419743:+ | gene-YOR195W_ZTW1 | rna-NM_001183614.3_ZTW1 | cds-NP_014838.3_ZTW1 | 99.3 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:690276-692741:+ | gene-YOR195W_Sparadoxus | rna-NM_001183614.3_Sparadoxus | cds-NP_014838.3_Sparadoxus | 87.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |