Gene name: SLD7
Reference locus (S288C): YOR060C
Gene biotype: protein_coding
Description: Mitochondrial morphogenesis protein SLD7; Protein with a role in chromosomal DNA replication; interacts with Sld3p and reduces its affinity for Cdc45p; deletion mutant has aberrant mitochondria
Top 10 interactors (score): CDC45 (0.998); SLD2 (0.995); DPB11 (0.991); MCM4 (0.99); SLD3 (0.988); MCM2 (0.985); CDC6 (0.976); MCM6 (0.973); MCM5 (0.97); SLD5 (0.969); PSF3 (0.955); MCM3 (0.94); DBF4 (0.935); PSF1 (0.934); PSF2 (0.931); MCM7 (0.928); ORC1 (0.924); ORC2 (0.921); ORC6 (0.921); MCM10 (0.915)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:424727-425500:- | gene-YOR060C_AKU4011 | rna-NM_001183479.1_AKU4011 | cds-NP_014703.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000088.1:7259-8032:+ | gene-YOR060C_BG1 | rna-NM_001183479.1_BG1 | cds-NP_014703.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:427439-428212:- | gene-YOR060C_Bruggeman | rna-NM_001183479.1_Bruggeman | cds-NP_014703.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:426187-426960:- | gene-YOR060C_CAT1 | rna-NM_001183479.1_CAT1 | cds-NP_014703.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:419413-420186:- | gene-YOR060C_CBS1585 | rna-NM_001183479.1_CBS1585 | cds-NP_014703.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:423720-424493:- | gene-YOR060C_CBS436 | rna-NM_001183479.1_CBS436 | cds-NP_014703.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:418740-419513:- | gene-YOR060C_CBS6412 | rna-NM_001183479.1_CBS6412 | cds-NP_014703.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:426024-426797:- | gene-YOR060C_CBS6413 | rna-NM_001183479.1_CBS6413 | cds-NP_014703.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:440374-441147:- | gene-YOR060C_CENPK1137D | rna-NM_001183479.1_CENPK1137D | cds-NP_014703.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:421442-422215:- | gene-YOR060C_EthanolRed | rna-NM_001183479.1_EthanolRed | cds-NP_014703.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:424778-425551:- | gene-YOR060C_FaliES1 | rna-NM_001183479.1_FaliES1 | cds-NP_014703.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000407.1:18813-19586:+ | gene-YOR060C_JAY291 | rna-NM_001183479.1_JAY291 | cds-NP_014703.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:432228-433001:- | gene-YOR060C_MUCL30387 | rna-NM_001183479.1_MUCL30387 | cds-NP_014703.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:436631-437404:- | gene-YOR060C_MUCL30388 | rna-NM_001183479.1_MUCL30388 | cds-NP_014703.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:426898-427671:- | gene-YOR060C_MUCL39482 | rna-NM_001183479.1_MUCL39482 | cds-NP_014703.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:442045-442818:- | gene-YOR060C_MUCL42920 | rna-NM_001183479.1_MUCL42920 | cds-NP_014703.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:440279-441052:- | gene-YOR060C_NCIM3186 | rna-NM_001183479.1_NCIM3186 | cds-NP_014703.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:433816-434589:- | gene-YOR060C_NCYC1407 | rna-NM_001183479.1_NCYC1407 | cds-NP_014703.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:432424-433197:- | gene-YOR060C_PE2H3 | rna-NM_001183479.1_PE2H3 | cds-NP_014703.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:442805-443578:- | gene-YOR060C_PE2H4 | rna-NM_001183479.1_PE2H4 | cds-NP_014703.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:440390-441163:- | gene-YOR060C_S288C | rna-NM_001183479.1_S288C | cds-NP_014703.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:408653-409426:- | gene-YOR060C_SA1 | rna-NM_001183479.1_SA1 | cds-NP_014703.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:423926-424699:- | gene-YOR060C_ThermosaccDry | rna-NM_001183479.1_ThermosaccDry | cds-NP_014703.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:425190-425963:- | gene-YOR060C_VR1 | rna-NM_001183479.1_VR1 | cds-NP_014703.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:157932-158705:- | gene-YOR060C_ZTW1 | rna-NM_001183479.1_ZTW1 | cds-NP_014703.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:429488-430261:- | gene-YOR060C_Sparadoxus | rna-NM_001183479.1_Sparadoxus | cds-NP_014703.1_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |