Gene name: SLA2
Reference locus (S288C): YNL243W
Gene biotype: protein_coding
Description: Adaptor protein that links actin to clathrin and endocytosis; involved in membrane cytoskeleton assembly and cell polarization; present in the actin cortical patch of the emerging bud tip; dimer in vivo; Belongs to the SLA2 family
Top 10 interactors (score): ABP1 (0.999); ARP2 (0.999); CLC1 (0.999); PAN1 (0.998); END3 (0.998); ENT1 (0.997); ACT1 (0.996); CHC1 (0.995); SLA1 (0.995); EDE1 (0.994); LAS17 (0.991); VRP1 (0.99); YAP1801 (0.99); YAP1802 (0.986); PRK1 (0.98); SAC6 (0.977); RVS167 (0.977); VPS28 (0.973); ENT2 (0.97); VPS1 (0.97)
Homologues (species, bitscore): HIP1R (Homo sapiens, 188.0); Hip1r (Mus musculus, 180.6); hip1 (Danio rerio, 195.3); hip1r (Xenopus tropicalis, 203.0); Hip1 (Drosophila melanogaster, 127.5); hipr-1 (Caenorhabditis elegans, 172.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:181836-184742:+ | gene-YNL243W_AKU4011 | rna-NM_001183081.2_AKU4011 | cds-NP_014156.2_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:85777-88683:+ | gene-YNL243W_BG1 | rna-NM_001183081.2_BG1 | cds-NP_014156.2_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:191640-194546:+ | gene-YNL243W_Bruggeman | rna-NM_001183081.2_Bruggeman | cds-NP_014156.2_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:198936-201842:+ | gene-YNL243W_CAT1 | rna-NM_001183081.2_CAT1 | cds-NP_014156.2_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:182235-185141:+ | gene-YNL243W_CBS1585 | rna-NM_001183081.2_CBS1585 | cds-NP_014156.2_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:177320-180226:+ | gene-YNL243W_CBS436 | rna-NM_001183081.2_CBS436 | cds-NP_014156.2_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:178272-181178:+ | gene-YNL243W_CBS6412 | rna-NM_001183081.2_CBS6412 | cds-NP_014156.2_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:178915-181821:+ | gene-YNL243W_CBS6413 | rna-NM_001183081.2_CBS6413 | cds-NP_014156.2_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:181862-184768:+ | gene-YNL243W_CENPK1137D | rna-NM_001183081.2_CENPK1137D | cds-NP_014156.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:179493-182399:+ | gene-YNL243W_EthanolRed | rna-NM_001183081.2_EthanolRed | cds-NP_014156.2_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:174228-177134:+ | gene-YNL243W_FaliES1 | rna-NM_001183081.2_FaliES1 | cds-NP_014156.2_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000082.1:85369-88275:+ | gene-YNL243W_JAY291 | rna-NM_001183081.2_JAY291 | cds-NP_014156.2_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:187424-190330:+ | gene-YNL243W_MUCL30387 | rna-NM_001183081.2_MUCL30387 | cds-NP_014156.2_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:186007-188913:+ | gene-YNL243W_MUCL30388 | rna-NM_001183081.2_MUCL30388 | cds-NP_014156.2_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:179725-182631:+ | gene-YNL243W_MUCL39482 | rna-NM_001183081.2_MUCL39482 | cds-NP_014156.2_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:181981-184887:+ | gene-YNL243W_MUCL42920 | rna-NM_001183081.2_MUCL42920 | cds-NP_014156.2_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:188020-190926:+ | gene-YNL243W_NCIM3186 | rna-NM_001183081.2_NCIM3186 | cds-NP_014156.2_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:181813-184719:+ | gene-YNL243W_NCYC1407 | rna-NM_001183081.2_NCYC1407 | cds-NP_014156.2_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:178713-181619:+ | gene-YNL243W_PE2H3 | rna-NM_001183081.2_PE2H3 | cds-NP_014156.2_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:178101-181007:+ | gene-YNL243W_PE2H4 | rna-NM_001183081.2_PE2H4 | cds-NP_014156.2_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:188051-190957:+ | gene-YNL243W_S288C | rna-NM_001183081.2_S288C | cds-NP_014156.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000040.1:61339-64245:- | gene-YNL243W_SA1 | rna-NM_001183081.2_SA1 | cds-NP_014156.2_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:175084-177990:+ | gene-YNL243W_ThermosaccDry | rna-NM_001183081.2_ThermosaccDry | cds-NP_014156.2_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:193970-196876:+ | gene-YNL243W_VR1 | rna-NM_001183081.2_VR1 | cds-NP_014156.2_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:85405-88311:+ | gene-YNL243W_ZTW1 | rna-NM_001183081.2_ZTW1 | cds-NP_014156.2_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:185345-188251:+ | gene-YNL243W_Sparadoxus | rna-NM_001183081.2_Sparadoxus | cds-NP_014156.2_Sparadoxus | 91.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |