Gene name: SKY1
Reference locus (S288C): YMR216C
Gene biotype: protein_coding
Description: Serine/threonine-protein kinase SKY1; SR protein kinase (SRPK); involved in regulating proteins involved in mRNA metabolism and cation homeostasis; similar to human SRPK1
Top 10 interactors (score): CEF1 (0.999); NPL3 (0.999); MUD2 (0.99); CDC40 (0.983); KNS1 (0.981); PRP19 (0.967); SNP1 (0.904); PTK2 (0.893); TRK1 (0.82); PRP28 (0.816); HRB1 (0.8); MTR10 (0.799); BUD31 (0.767); MSL5 (0.763); LEO1 (0.717); KSP1 (0.681); PTK1 (0.65); NPR1 (0.649); SAT4 (0.648); PPZ1 (0.628)
Homologues (species, bitscore): SRPK1 (Homo sapiens, 365.5); Srpk1 (Mus musculus, 369.0); srpk1b (Danio rerio, 363.2); srpk2 (Xenopus tropicalis, 357.8); SRPK (Drosophila melanogaster, 370.9); spk-1 (Caenorhabditis elegans, 345.9); AT5G22840 (Arabidopsis thaliana, 339.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:738732-740960:- | gene-YMR216C_AKU4011 | rna-NM_001182723.1_AKU4011 | cds-NP_013943.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:213647-215875:+ | gene-YMR216C_BG1 | rna-NM_001182723.1_BG1 | cds-NP_013943.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:682947-685175:- | gene-YMR216C_Bruggeman | rna-NM_001182723.1_Bruggeman | cds-NP_013943.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:686204-688432:- | gene-YMR216C_CAT1 | rna-NM_001182723.1_CAT1 | cds-NP_013943.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:670993-673221:- | gene-YMR216C_CBS1585 | rna-NM_001182723.1_CBS1585 | cds-NP_013943.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:675245-677473:- | gene-YMR216C_CBS436 | rna-NM_001182723.1_CBS436 | cds-NP_013943.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:782554-784782:- | gene-YMR216C_CBS6412 | rna-NM_001182723.1_CBS6412 | cds-NP_013943.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:670145-672373:- | gene-YMR216C_CBS6413 | rna-NM_001182723.1_CBS6413 | cds-NP_013943.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:693532-695760:- | gene-YMR216C_CENPK1137D | rna-NM_001182723.1_CENPK1137D | cds-NP_013943.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:731200-733428:- | gene-YMR216C_EthanolRed | rna-NM_001182723.1_EthanolRed | cds-NP_013943.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:676852-679080:- | gene-YMR216C_FaliES1 | rna-NM_001182723.1_FaliES1 | cds-NP_013943.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:106956-109184:+ | gene-YMR216C_JAY291 | rna-NM_001182723.1_JAY291 | cds-NP_013943.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:676494-678722:- | gene-YMR216C_MUCL30387 | rna-NM_001182723.1_MUCL30387 | cds-NP_013943.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:683273-685501:- | gene-YMR216C_MUCL30388 | rna-NM_001182723.1_MUCL30388 | cds-NP_013943.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:672063-674291:- | gene-YMR216C_MUCL39482 | rna-NM_001182723.1_MUCL39482 | cds-NP_013943.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:679387-681615:- | gene-YMR216C_MUCL42920 | rna-NM_001182723.1_MUCL42920 | cds-NP_013943.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:698765-700993:- | gene-YMR216C_NCIM3186 | rna-NM_001182723.1_NCIM3186 | cds-NP_013943.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:671719-673947:- | gene-YMR216C_NCYC1407 | rna-NM_001182723.1_NCYC1407 | cds-NP_013943.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:681565-683793:- | gene-YMR216C_PE2H3 | rna-NM_001182723.1_PE2H3 | cds-NP_013943.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:682580-684808:- | gene-YMR216C_PE2H4 | rna-NM_001182723.1_PE2H4 | cds-NP_013943.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:698811-701039:- | gene-YMR216C_S288C | rna-NM_001182723.1_S288C | cds-NP_013943.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:107070-109298:+ | gene-YMR216C_SA1 | rna-NM_001182723.1_SA1 | cds-NP_013943.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:673023-675251:- | gene-YMR216C_ThermosaccDry | rna-NM_001182723.1_ThermosaccDry | cds-NP_013943.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:686092-688320:- | gene-YMR216C_VR1 | rna-NM_001182723.1_VR1 | cds-NP_013943.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:88730-90958:- | gene-YMR216C_ZTW1 | rna-NM_001182723.1_ZTW1 | cds-NP_013943.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:690815-693055:- | gene-YMR216C_Sparadoxus | rna-NM_001182723.1_Sparadoxus | cds-NP_013943.1_Sparadoxus | 89.6 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |