Gene name: SKO1
Reference locus (S288C): YNL167C
Gene biotype: protein_coding
Description: CRE-binding bZIP protein SKO1; Basic leucine zipper transcription factor of the ATF/CREB family; forms a complex with Tup1p and Cyc8p to both activate and repress transcription; cytosolic and nuclear protein involved in osmotic and oxidative stress responses
Top 10 interactors (score): HOG1 (0.999); YAP1 (0.999); GCN4 (0.999); TUP1 (0.998); CYC8 (0.997); SLT2 (0.996); FUS3 (0.995); KSS1 (0.994); ACA1 (0.971); SMK1 (0.956); HOT1 (0.955); KDX1 (0.93); PBS2 (0.93); GCN5 (0.917); SKN7 (0.916); HDA1 (0.904); HTB1 (0.903); HTB2 (0.903); SNF5 (0.902); RPO21 (0.9)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:313141-315087:- | gene-YNL167C_AKU4011 | rna-NM_001183005.1_AKU4011 | cds-NP_014232.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:217107-219053:- | gene-YNL167C_BG1 | rna-NM_001183005.1_BG1 | cds-NP_014232.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:323199-325145:- | gene-YNL167C_Bruggeman | rna-NM_001183005.1_Bruggeman | cds-NP_014232.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:366076-368022:- | gene-YNL167C_CAT1 | rna-NM_001183005.1_CAT1 | cds-NP_014232.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:313793-315739:- | gene-YNL167C_CBS1585 | rna-NM_001183005.1_CBS1585 | cds-NP_014232.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:382114-384060:- | gene-YNL167C_CBS436 | rna-NM_001183005.1_CBS436 | cds-NP_014232.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:309198-311144:- | gene-YNL167C_CBS6412 | rna-NM_001183005.1_CBS6412 | cds-NP_014232.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:310226-312172:- | gene-YNL167C_CBS6413 | rna-NM_001183005.1_CBS6413 | cds-NP_014232.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:313229-315172:- | gene-YNL167C_CENPK1137D | rna-NM_001183005.1_CENPK1137D | cds-NP_014232.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:310114-312060:- | gene-YNL167C_EthanolRed | rna-NM_001183005.1_EthanolRed | cds-NP_014232.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:306027-307973:- | gene-YNL167C_FaliES1 | rna-NM_001183005.1_FaliES1 | cds-NP_014232.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000260.1:10525-12471:+ | gene-YNL167C_JAY291 | rna-NM_001183005.1_JAY291 | cds-NP_014232.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:319017-320963:- | gene-YNL167C_MUCL30387 | rna-NM_001183005.1_MUCL30387 | cds-NP_014232.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:353571-355517:- | gene-YNL167C_MUCL30388 | rna-NM_001183005.1_MUCL30388 | cds-NP_014232.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:311032-312978:- | gene-YNL167C_MUCL39482 | rna-NM_001183005.1_MUCL39482 | cds-NP_014232.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:313437-315383:- | gene-YNL167C_MUCL42920 | rna-NM_001183005.1_MUCL42920 | cds-NP_014232.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:319385-321328:- | gene-YNL167C_NCIM3186 | rna-NM_001183005.1_NCIM3186 | cds-NP_014232.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:313126-315072:- | gene-YNL167C_NCYC1407 | rna-NM_001183005.1_NCYC1407 | cds-NP_014232.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:310088-312031:- | gene-YNL167C_PE2H3 | rna-NM_001183005.1_PE2H3 | cds-NP_014232.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:309476-311419:- | gene-YNL167C_PE2H4 | rna-NM_001183005.1_PE2H4 | cds-NP_014232.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:319416-321359:- | gene-YNL167C_S288C | rna-NM_001183005.1_S288C | cds-NP_014232.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000018.1:92214-94160:+ | gene-YNL167C_SA1 | rna-NM_001183005.1_SA1 | cds-NP_014232.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:306884-308830:- | gene-YNL167C_ThermosaccDry | rna-NM_001183005.1_ThermosaccDry | cds-NP_014232.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:325408-327354:- | gene-YNL167C_VR1 | rna-NM_001183005.1_VR1 | cds-NP_014232.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:216706-218653:- | gene-YNL167C_ZTW1 | rna-NM_001183005.1_ZTW1 | cds-NP_014232.1_ZTW1 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:317477-319432:- | gene-YNL167C_Sparadoxus | rna-NM_001183005.1_Sparadoxus | cds-NP_014232.1_Sparadoxus | 88.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |