Gene name: SKG1
Reference locus (S288C): YKR100C
Gene biotype: protein_coding
Description: Suppressor of lethality of KEX2 GAS1 double null mutant protein 1; Transmembrane protein with a role in cell wall polymer composition; localizes on inner surface of plasma membrane at bud and in daughter cell; SKG1 has a paralog, AIM20, that arose from the whole genome duplication
Top 10 interactors (score): PTK1 (0.824); YKL033W-A (0.813); ECM9 (0.78); RRT8 (0.76); YJL107C (0.749); YPR089W (0.749); PIR5 (0.748); TPH3 (0.746); TMA23 (0.715); PRM10 (0.714); ICS2 (0.712); EMC3 (0.712); PSP2 (0.699); PFF1 (0.699); GPI14 (0.697); SEA4 (0.693); KSH1 (0.675); TRM2 (0.674); STE23 (0.674); YJL127C-B (0.63)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:624850-625917:- | gene-YKR100C_AKU4011 | rna-NM_001179890.1_AKU4011 | cds-NP_013026.2_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:18155-19222:+ | gene-YKR100C_BG1 | rna-NM_001179890.1_BG1 | cds-NP_013026.2_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:647461-648528:- | gene-YKR100C_Bruggeman | rna-NM_001179890.1_Bruggeman | cds-NP_013026.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:644999-646066:- | gene-YKR100C_CAT1 | rna-NM_001179890.1_CAT1 | cds-NP_013026.2_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:637332-638399:- | gene-YKR100C_CBS1585 | rna-NM_001179890.1_CBS1585 | cds-NP_013026.2_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:635746-636813:- | gene-YKR100C_CBS436 | rna-NM_001179890.1_CBS436 | cds-NP_013026.2_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:620620-621687:- | gene-YKR100C_CBS6412 | rna-NM_001179890.1_CBS6412 | cds-NP_013026.2_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:637152-638219:- | gene-YKR100C_CBS6413 | rna-NM_001179890.1_CBS6413 | cds-NP_013026.2_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:638553-639620:- | gene-YKR100C_CENPK1137D | rna-NM_001179890.1_CENPK1137D | cds-NP_013026.2_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:634738-635805:- | gene-YKR100C_EthanolRed | rna-NM_001179890.1_EthanolRed | cds-NP_013026.2_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:638634-639701:- | gene-YKR100C_FaliES1 | rna-NM_001179890.1_FaliES1 | cds-NP_013026.2_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000426.1:5265-6332:+ | gene-YKR100C_JAY291 | rna-NM_001179890.1_JAY291 | cds-NP_013026.2_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:646972-648039:- | gene-YKR100C_MUCL30387 | rna-NM_001179890.1_MUCL30387 | cds-NP_013026.2_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:641286-642353:- | gene-YKR100C_MUCL30388 | rna-NM_001179890.1_MUCL30388 | cds-NP_013026.2_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:636171-637238:- | gene-YKR100C_MUCL39482 | rna-NM_001179890.1_MUCL39482 | cds-NP_013026.2_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:642229-643296:- | gene-YKR100C_MUCL42920 | rna-NM_001179890.1_MUCL42920 | cds-NP_013026.2_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:638890-639957:- | gene-YKR100C_NCIM3186 | rna-NM_001179890.1_NCIM3186 | cds-NP_013026.2_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:636594-637661:- | gene-YKR100C_NCYC1407 | rna-NM_001179890.1_NCYC1407 | cds-NP_013026.2_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:661845-662912:- | gene-YKR100C_PE2H3 | rna-NM_001179890.1_PE2H3 | cds-NP_013026.2_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:646282-647349:- | gene-YKR100C_PE2H4 | rna-NM_001179890.1_PE2H4 | cds-NP_013026.2_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:638901-639968:- | gene-YKR100C_S288C | rna-NM_001179890.1_S288C | cds-NP_013026.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:18590-19657:+ | gene-YKR100C_SA1 | rna-NM_001179890.1_SA1 | cds-NP_013026.2_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:637879-638946:- | gene-YKR100C_ThermosaccDry | rna-NM_001179890.1_ThermosaccDry | cds-NP_013026.2_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:637167-638234:- | gene-YKR100C_VR1 | rna-NM_001179890.1_VR1 | cds-NP_013026.2_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:634842-635909:- | gene-YKR100C_ZTW1 | rna-NM_001179890.1_ZTW1 | cds-NP_013026.2_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:660223-661293:- | gene-YKR100C_Sparadoxus | rna-NM_001179890.1_Sparadoxus | cds-NP_013026.2_Sparadoxus | 90.7 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |