Gene name: SIP5
Reference locus (S288C): YMR140W
Gene biotype: protein_coding
Description: Protein of unknown function; interacts with both the Reg1p/Glc7p phosphatase and the Snf1p kinase; forms cytoplasmic foci upon DNA replication stress; Belongs to the SIP5 family
Top 10 interactors (score): TFG2 (0.918); SNF1 (0.909); NCE103 (0.872); PYC1 (0.872); VHS1 (0.835); BNI4 (0.78); REF2 (0.78); MMS2 (0.772); CUE5 (0.762); UBC13 (0.759); YIL154C (0.715); STD1 (0.708); GLC7 (0.701); SAK1 (0.652); GLC8 (0.62); NST1 (0.605); ARL3 (0.584); SDS22 (0.576); REG2 (0.574); YNR029C (0.573)
Homologues (species, bitscore): AT1G17145 (Arabidopsis thaliana, 64.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:587211-588680:+ | gene-YMR140W_AKU4011 | rna-NM_001182642.1_AKU4011 | cds-NP_013860.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000068.1:83852-85321:- | gene-YMR140W_BG1 | rna-NM_001182642.1_BG1 | cds-NP_013860.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:530394-531863:+ | gene-YMR140W_Bruggeman | rna-NM_001182642.1_Bruggeman | cds-NP_013860.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:532609-534078:+ | gene-YMR140W_CAT1 | rna-NM_001182642.1_CAT1 | cds-NP_013860.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:520135-521604:+ | gene-YMR140W_CBS1585 | rna-NM_001182642.1_CBS1585 | cds-NP_013860.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:524024-525493:+ | gene-YMR140W_CBS436 | rna-NM_001182642.1_CBS436 | cds-NP_013860.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:633128-634597:+ | gene-YMR140W_CBS6412 | rna-NM_001182642.1_CBS6412 | cds-NP_013860.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:518695-520164:+ | gene-YMR140W_CBS6413 | rna-NM_001182642.1_CBS6413 | cds-NP_013860.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:542233-543702:+ | gene-YMR140W_CENPK1137D | rna-NM_001182642.1_CENPK1137D | cds-NP_013860.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:518323-519792:+ | gene-YMR140W_EthanolRed | rna-NM_001182642.1_EthanolRed | cds-NP_013860.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:525322-526791:+ | gene-YMR140W_FaliES1 | rna-NM_001182642.1_FaliES1 | cds-NP_013860.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000294.1:1254-2723:- | gene-YMR140W_JAY291 | rna-NM_001182642.1_JAY291 | cds-NP_013860.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:525119-526588:+ | gene-YMR140W_MUCL30387 | rna-NM_001182642.1_MUCL30387 | cds-NP_013860.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:530651-532120:+ | gene-YMR140W_MUCL30388 | rna-NM_001182642.1_MUCL30388 | cds-NP_013860.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:520836-522305:+ | gene-YMR140W_MUCL39482 | rna-NM_001182642.1_MUCL39482 | cds-NP_013860.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:527130-528599:+ | gene-YMR140W_MUCL42920 | rna-NM_001182642.1_MUCL42920 | cds-NP_013860.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:547668-549137:+ | gene-YMR140W_NCIM3186 | rna-NM_001182642.1_NCIM3186 | cds-NP_013860.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:520474-521943:+ | gene-YMR140W_NCYC1407 | rna-NM_001182642.1_NCYC1407 | cds-NP_013860.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:530911-532380:+ | gene-YMR140W_PE2H3 | rna-NM_001182642.1_PE2H3 | cds-NP_013860.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:531370-532839:+ | gene-YMR140W_PE2H4 | rna-NM_001182642.1_PE2H4 | cds-NP_013860.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:547714-549183:+ | gene-YMR140W_S288C | rna-NM_001182642.1_S288C | cds-NP_013860.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000048.1:22087-23556:- | gene-YMR140W_SA1 | rna-NM_001182642.1_SA1 | cds-NP_013860.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:520721-522190:+ | gene-YMR140W_ThermosaccDry | rna-NM_001182642.1_ThermosaccDry | cds-NP_013860.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:533424-534893:+ | gene-YMR140W_VR1 | rna-NM_001182642.1_VR1 | cds-NP_013860.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:495865-497334:+ | gene-YMR140W_ZTW1 | rna-NM_001182642.1_ZTW1 | cds-NP_013860.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:532222-533691:+ | gene-YMR140W_Sparadoxus | rna-NM_001182642.1_Sparadoxus | cds-NP_013860.1_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |