Gene name: SIP18
Reference locus (S288C): YMR175W
Gene biotype: protein_coding
Description: Protein SIP18; Phospholipid-binding hydrophilin; essential to overcome desiccation-rehydration process; expression is induced by osmotic stress; SIP18 has a paralog, GRE1, that arose from the whole genome duplication
Top 10 interactors (score): GRE1 (0.995); PAI3 (0.986); TKL2 (0.935); FMP16 (0.929); NQM1 (0.927); ALD3 (0.917); HXT5 (0.917); YBR116C (0.911); DDR2 (0.91); SPG4 (0.91); HBT1 (0.872); GND2 (0.863); HSP12 (0.859); RTN2 (0.826); MSC1 (0.822); STF2 (0.816); DCS2 (0.812); OM45 (0.793); YJL144W (0.783); HSP26 (0.755)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:650932-651171:+ | gene-YMR175W_AKU4011 | rna-NM_001182681.1_AKU4011 | cds-NP_013900.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000068.1:21942-22181:- | gene-YMR175W_BG1 | rna-NM_001182681.1_BG1 | cds-NP_013900.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:595198-595437:+ | gene-YMR175W_Bruggeman | rna-NM_001182681.1_Bruggeman | cds-NP_013900.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:597924-598163:+ | gene-YMR175W_CAT1 | rna-NM_001182681.1_CAT1 | cds-NP_013900.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:583214-583453:+ | gene-YMR175W_CBS1585 | rna-NM_001182681.1_CBS1585 | cds-NP_013900.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:587467-587706:+ | gene-YMR175W_CBS436 | rna-NM_001182681.1_CBS436 | cds-NP_013900.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:695756-695995:+ | gene-YMR175W_CBS6412 | rna-NM_001182681.1_CBS6412 | cds-NP_013900.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:582358-582597:+ | gene-YMR175W_CBS6413 | rna-NM_001182681.1_CBS6413 | cds-NP_013900.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:605562-605801:+ | gene-YMR175W_CENPK1137D | rna-NM_001182681.1_CENPK1137D | cds-NP_013900.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:643593-643832:+ | gene-YMR175W_EthanolRed | rna-NM_001182681.1_EthanolRed | cds-NP_013900.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:588530-588769:+ | gene-YMR175W_FaliES1 | rna-NM_001182681.1_FaliES1 | cds-NP_013900.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000265.1:21761-22000:- | gene-YMR175W_JAY291 | rna-NM_001182681.1_JAY291 | cds-NP_013900.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:588744-588983:+ | gene-YMR175W_MUCL30387 | rna-NM_001182681.1_MUCL30387 | cds-NP_013900.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:595528-595767:+ | gene-YMR175W_MUCL30388 | rna-NM_001182681.1_MUCL30388 | cds-NP_013900.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:584266-584505:+ | gene-YMR175W_MUCL39482 | rna-NM_001182681.1_MUCL39482 | cds-NP_013900.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:591643-591882:+ | gene-YMR175W_MUCL42920 | rna-NM_001182681.1_MUCL42920 | cds-NP_013900.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:610970-611209:+ | gene-YMR175W_NCIM3186 | rna-NM_001182681.1_NCIM3186 | cds-NP_013900.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:583901-584140:+ | gene-YMR175W_NCYC1407 | rna-NM_001182681.1_NCYC1407 | cds-NP_013900.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:593801-594040:+ | gene-YMR175W_PE2H3 | rna-NM_001182681.1_PE2H3 | cds-NP_013900.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:594794-595033:+ | gene-YMR175W_PE2H4 | rna-NM_001182681.1_PE2H4 | cds-NP_013900.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:611016-611255:+ | gene-YMR175W_S288C | rna-NM_001182681.1_S288C | cds-NP_013900.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:196857-197096:- | gene-YMR175W_SA1 | rna-NM_001182681.1_SA1 | cds-NP_013900.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:585187-585426:+ | gene-YMR175W_ThermosaccDry | rna-NM_001182681.1_ThermosaccDry | cds-NP_013900.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:598359-598598:+ | gene-YMR175W_VR1 | rna-NM_001182681.1_VR1 | cds-NP_013900.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:977-1216:+ | gene-YMR175W_ZTW1 | rna-NM_001182681.1_ZTW1 | cds-NP_013900.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:603106-603345:+ | gene-YMR175W_Sparadoxus | rna-NM_001182681.1_Sparadoxus | cds-NP_013900.1_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |