Gene name: SIP1
Reference locus (S288C): YDR422C
Gene biotype: protein_coding
Description: Alternate beta-subunit of the Snf1p kinase complex; may confer substrate specificity; vacuolar protein containing KIS (Kinase-Interacting Sequence) and ASC (Association with Snf1 kinase Complex) domains involved in protein interactions
Top 10 interactors (score): SNF1 (0.999); SNF4 (0.999); GAL83 (0.994); SIP2 (0.988); SAK1 (0.971); TOS3 (0.916); VPS34 (0.911); VPS30 (0.908); VPS15 (0.9); ELM1 (0.896); SDS23 (0.867); SDS24 (0.867); KIN4 (0.801); MIG1 (0.797); YPL150W (0.792); FRK1 (0.792); SIP4 (0.788); CAT8 (0.784); ADR1 (0.761); GLC7 (0.756)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1255593-1258040:- | gene-YDR422C_AKU4011 | rna-NM_001180730.3_AKU4011 | cds-NP_010710.4_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:133933-136380:- | gene-YDR422C_BG1 | rna-NM_001180730.3_BG1 | cds-NP_010710.4_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1285984-1288431:- | gene-YDR422C_Bruggeman | rna-NM_001180730.3_Bruggeman | cds-NP_010710.4_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1264177-1266624:- | gene-YDR422C_CAT1 | rna-NM_001180730.3_CAT1 | cds-NP_010710.4_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1249922-1252369:- | gene-YDR422C_CBS1585 | rna-NM_001180730.3_CBS1585 | cds-NP_010710.4_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1269257-1271704:- | gene-YDR422C_CBS436 | rna-NM_001180730.3_CBS436 | cds-NP_010710.4_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1245888-1248335:- | gene-YDR422C_CBS6412 | rna-NM_001180730.3_CBS6412 | cds-NP_010710.4_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1268037-1270484:- | gene-YDR422C_CBS6413 | rna-NM_001180730.3_CBS6413 | cds-NP_010710.4_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1313994-1316441:- | gene-YDR422C_CENPK1137D | rna-NM_001180730.3_CENPK1137D | cds-NP_010710.4_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1259176-1261623:- | gene-YDR422C_EthanolRed | rna-NM_001180730.3_EthanolRed | cds-NP_010710.4_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1262483-1264930:- | gene-YDR422C_FaliES1 | rna-NM_001180730.3_FaliES1 | cds-NP_010710.4_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000263.1:6759-9206:- | gene-YDR422C_JAY291 | rna-NM_001180730.3_JAY291 | cds-NP_010710.4_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1269625-1272072:- | gene-YDR422C_MUCL30387 | rna-NM_001180730.3_MUCL30387 | cds-NP_010710.4_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1251562-1254009:- | gene-YDR422C_MUCL30388 | rna-NM_001180730.3_MUCL30388 | cds-NP_010710.4_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1241414-1243861:- | gene-YDR422C_MUCL39482 | rna-NM_001180730.3_MUCL39482 | cds-NP_010710.4_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1183817-1186264:- | gene-YDR422C_MUCL42920 | rna-NM_001180730.3_MUCL42920 | cds-NP_010710.4_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1315249-1317696:- | gene-YDR422C_NCIM3186 | rna-NM_001180730.3_NCIM3186 | cds-NP_010710.4_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1255178-1257625:- | gene-YDR422C_NCYC1407 | rna-NM_001180730.3_NCYC1407 | cds-NP_010710.4_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1266002-1268449:- | gene-YDR422C_PE2H3 | rna-NM_001180730.3_PE2H3 | cds-NP_010710.4_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1271570-1274017:- | gene-YDR422C_PE2H4 | rna-NM_001180730.3_PE2H4 | cds-NP_010710.4_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1315326-1317773:- | gene-YDR422C_S288C | rna-NM_001180730.3_S288C | cds-NP_010710.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000082.1:39448-41895:+ | gene-YDR422C_SA1 | rna-NM_001180730.3_SA1 | cds-NP_010710.4_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1266745-1269192:- | gene-YDR422C_ThermosaccDry | rna-NM_001180730.3_ThermosaccDry | cds-NP_010710.4_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1281964-1284411:- | gene-YDR422C_VR1 | rna-NM_001180730.3_VR1 | cds-NP_010710.4_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:309389-311836:- | gene-YDR422C_ZTW1 | rna-NM_001180730.3_ZTW1 | cds-NP_010710.4_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1263073-1265520:- | gene-YDR422C_Sparadoxus | rna-NM_001180730.3_Sparadoxus | cds-NP_010710.4_Sparadoxus | 89.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |