Gene name: SIL1
Reference locus (S288C): YOL031C
Gene biotype: protein_coding
Description: Nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p; required for protein translocation into the endoplasmic reticulum (ER); homolog of Yarrowia lipolytica SLS1; GrpE-like protein; Belongs to the SIL1 family
Top 10 interactors (score): KAR2 (0.999); LHS1 (0.997); MBF1 (0.9); STI1 (0.898); SHP1 (0.887); RPL5 (0.88); RPL25 (0.88); RPS3 (0.879); SEC61 (0.878); MRPS9 (0.862); RTC6 (0.858); MNP1 (0.858); MRPL8 (0.856); MRP17 (0.847); YDR274C (0.845); SEC63 (0.844); RPL38 (0.82); SSE1 (0.819); HCH1 (0.807); AHA1 (0.807)
Homologues (species, bitscore): SIL1 (Homo sapiens, 53.1); CG10420 (Drosophila melanogaster, 51.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:250626-251891:- | gene-YOL031C_AKU4011 | rna-NM_001183285.1_AKU4011 | cds-NP_014611.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:66245-67510:- | gene-YOL031C_BG1 | rna-NM_001183285.1_BG1 | cds-NP_014611.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:253479-254744:- | gene-YOL031C_Bruggeman | rna-NM_001183285.1_Bruggeman | cds-NP_014611.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:251341-252606:- | gene-YOL031C_CAT1 | rna-NM_001183285.1_CAT1 | cds-NP_014611.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:245296-246561:- | gene-YOL031C_CBS1585 | rna-NM_001183285.1_CBS1585 | cds-NP_014611.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:249573-250838:- | gene-YOL031C_CBS436 | rna-NM_001183285.1_CBS436 | cds-NP_014611.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:244660-245925:- | gene-YOL031C_CBS6412 | rna-NM_001183285.1_CBS6412 | cds-NP_014611.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:252179-253444:- | gene-YOL031C_CBS6413 | rna-NM_001183285.1_CBS6413 | cds-NP_014611.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:265964-267229:- | gene-YOL031C_CENPK1137D | rna-NM_001183285.1_CENPK1137D | cds-NP_014611.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:247614-248879:- | gene-YOL031C_EthanolRed | rna-NM_001183285.1_EthanolRed | cds-NP_014611.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:250530-251795:- | gene-YOL031C_FaliES1 | rna-NM_001183285.1_FaliES1 | cds-NP_014611.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000018.1:14664-15929:+ | gene-YOL031C_JAY291 | rna-NM_001183285.1_JAY291 | cds-NP_014611.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:256501-257766:- | gene-YOL031C_MUCL30387 | rna-NM_001183285.1_MUCL30387 | cds-NP_014611.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:260852-262117:- | gene-YOL031C_MUCL30388 | rna-NM_001183285.1_MUCL30388 | cds-NP_014611.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:252781-254046:- | gene-YOL031C_MUCL39482 | rna-NM_001183285.1_MUCL39482 | cds-NP_014611.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:267712-268977:- | gene-YOL031C_MUCL42920 | rna-NM_001183285.1_MUCL42920 | cds-NP_014611.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:266153-267418:- | gene-YOL031C_NCIM3186 | rna-NM_001183285.1_NCIM3186 | cds-NP_014611.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:259521-260786:- | gene-YOL031C_NCYC1407 | rna-NM_001183285.1_NCYC1407 | cds-NP_014611.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:241939-243204:- | gene-YOL031C_PE2H3 | rna-NM_001183285.1_PE2H3 | cds-NP_014611.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:252913-254178:- | gene-YOL031C_PE2H4 | rna-NM_001183285.1_PE2H4 | cds-NP_014611.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:266264-267529:- | gene-YOL031C_S288C | rna-NM_001183285.1_S288C | cds-NP_014611.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:234263-235528:- | gene-YOL031C_SA1 | rna-NM_001183285.1_SA1 | cds-NP_014611.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:249101-250366:- | gene-YOL031C_ThermosaccDry | rna-NM_001183285.1_ThermosaccDry | cds-NP_014611.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:249164-250429:- | gene-YOL031C_VR1 | rna-NM_001183285.1_VR1 | cds-NP_014611.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:248963-250228:- | gene-YOL031C_ZTW1 | rna-NM_001183285.1_ZTW1 | cds-NP_014611.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:257350-258615:- | gene-YOL031C_Sparadoxus | rna-NM_001183285.1_Sparadoxus | cds-NP_014611.1_Sparadoxus | 87.8 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |