Gene name: SHR5
Reference locus (S288C): YOL110W
Gene biotype: protein_coding
Description: Ras modification protein ERF4; Palmitoyltransferase subunit; this complex adds a palmitoyl lipid moiety to heterolipidated substrates such as Ras1p and Ras2p through a thioester linkage; palmitoylation is required for Ras2p membrane localization; Palmitoyltransferase is composed of Shr5p and Erf2
Top 10 interactors (score): ERF2 (0.991); RAS2 (0.94); AKR1 (0.92); SWF1 (0.918); PFA4 (0.827); PFA3 (0.819); AKR2 (0.808); PFA5 (0.754); SAC1 (0.748); LCB1 (0.72); ORM2 (0.72); LCB2 (0.72); TSC3 (0.72); ORM1 (0.72); YCK2 (0.718); YNR021W (0.714); ECT1 (0.66); VAC8 (0.658); STE14 (0.658); PCA1 (0.65)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:97818-98531:+ | gene-YOL110W_AKU4011 | rna-NM_001183364.1_AKU4011 | cds-NP_014531.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000172.1:63450-64163:+ | gene-YOL110W_BG1 | rna-NM_001183364.1_BG1 | cds-NP_014531.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:99093-99806:+ | gene-YOL110W_Bruggeman | rna-NM_001183364.1_Bruggeman | cds-NP_014531.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:98288-99001:+ | gene-YOL110W_CAT1 | rna-NM_001183364.1_CAT1 | cds-NP_014531.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:92292-93005:+ | gene-YOL110W_CBS1585 | rna-NM_001183364.1_CBS1585 | cds-NP_014531.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:98132-98845:+ | gene-YOL110W_CBS436 | rna-NM_001183364.1_CBS436 | cds-NP_014531.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:92156-92869:+ | gene-YOL110W_CBS6412 | rna-NM_001183364.1_CBS6412 | cds-NP_014531.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:98624-99337:+ | gene-YOL110W_CBS6413 | rna-NM_001183364.1_CBS6413 | cds-NP_014531.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:109071-109784:+ | gene-YOL110W_CENPK1137D | rna-NM_001183364.1_CENPK1137D | cds-NP_014531.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:96090-96803:+ | gene-YOL110W_EthanolRed | rna-NM_001183364.1_EthanolRed | cds-NP_014531.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:98119-98832:+ | gene-YOL110W_FaliES1 | rna-NM_001183364.1_FaliES1 | cds-NP_014531.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000203.1:15331-16044:+ | gene-YOL110W_JAY291 | rna-NM_001183364.1_JAY291 | cds-NP_014531.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:103735-104448:+ | gene-YOL110W_MUCL30387 | rna-NM_001183364.1_MUCL30387 | cds-NP_014531.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:106738-107451:+ | gene-YOL110W_MUCL30388 | rna-NM_001183364.1_MUCL30388 | cds-NP_014531.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:100231-100944:+ | gene-YOL110W_MUCL39482 | rna-NM_001183364.1_MUCL39482 | cds-NP_014531.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:116363-117076:+ | gene-YOL110W_MUCL42920 | rna-NM_001183364.1_MUCL42920 | cds-NP_014531.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:109065-109778:+ | gene-YOL110W_NCIM3186 | rna-NM_001183364.1_NCIM3186 | cds-NP_014531.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:106265-106978:+ | gene-YOL110W_NCYC1407 | rna-NM_001183364.1_NCYC1407 | cds-NP_014531.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:84731-85444:+ | gene-YOL110W_PE2H3 | rna-NM_001183364.1_PE2H3 | cds-NP_014531.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:101659-102372:+ | gene-YOL110W_PE2H4 | rna-NM_001183364.1_PE2H4 | cds-NP_014531.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:109176-109889:+ | gene-YOL110W_S288C | rna-NM_001183364.1_S288C | cds-NP_014531.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:82603-83316:+ | gene-YOL110W_SA1 | rna-NM_001183364.1_SA1 | cds-NP_014531.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:97257-97970:+ | gene-YOL110W_ThermosaccDry | rna-NM_001183364.1_ThermosaccDry | cds-NP_014531.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:97908-98621:+ | gene-YOL110W_VR1 | rna-NM_001183364.1_VR1 | cds-NP_014531.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:96981-97694:+ | gene-YOL110W_ZTW1 | rna-NM_001183364.1_ZTW1 | cds-NP_014531.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:99775-100488:+ | gene-YOL110W_Sparadoxus | rna-NM_001183364.1_Sparadoxus | cds-NP_014531.1_Sparadoxus | 92.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |