Gene name: SHE4
Reference locus (S288C): YOR035C
Gene biotype: protein_coding
Description: SWI5-dependent HO expression protein 4; Protein containing a UCS (UNC-45/CRO1/SHE4) domain; binds to myosin motor domains to regulate myosin function; involved in endocytosis, polarization of the actin cytoskeleton, and asymmetric mRNA localization
Top 10 interactors (score): MYO1 (0.997); UFD2 (0.995); HSP82 (0.993); HSC82 (0.99); CAP1 (0.989); MYO4 (0.982); MYO3 (0.978); MYO5 (0.964); URH1 (0.962); MYO2 (0.956); PDE2 (0.877); ACT1 (0.766); CMD1 (0.707); SSA1 (0.662); SSA2 (0.662); PRP6 (0.661); SSA3 (0.658); SSA4 (0.658); AHA1 (0.655); SGT2 (0.65)
Homologues (species, bitscore): unc45a (Danio rerio, 59.3); unc45a (Xenopus tropicalis, 54.3); unc-45 (Drosophila melanogaster, 60.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:382076-384445:- | gene-YOR035C_AKU4011 | rna-NM_001183454.1_AKU4011 | cds-NP_014678.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:197652-200021:- | gene-YOR035C_BG1 | rna-NM_001183454.1_BG1 | cds-NP_014678.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:384817-387186:- | gene-YOR035C_Bruggeman | rna-NM_001183454.1_Bruggeman | cds-NP_014678.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:382970-385339:- | gene-YOR035C_CAT1 | rna-NM_001183454.1_CAT1 | cds-NP_014678.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:376767-379136:- | gene-YOR035C_CBS1585 | rna-NM_001183454.1_CBS1585 | cds-NP_014678.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:381121-383490:- | gene-YOR035C_CBS436 | rna-NM_001183454.1_CBS436 | cds-NP_014678.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:376121-378490:- | gene-YOR035C_CBS6412 | rna-NM_001183454.1_CBS6412 | cds-NP_014678.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:383496-385865:- | gene-YOR035C_CBS6413 | rna-NM_001183454.1_CBS6413 | cds-NP_014678.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:397734-400103:- | gene-YOR035C_CENPK1137D | rna-NM_001183454.1_CENPK1137D | cds-NP_014678.1_CENPK1137D | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:378774-381143:- | gene-YOR035C_EthanolRed | rna-NM_001183454.1_EthanolRed | cds-NP_014678.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:382122-384491:- | gene-YOR035C_FaliES1 | rna-NM_001183454.1_FaliES1 | cds-NP_014678.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000035.1:52769-55138:- | gene-YOR035C_JAY291 | rna-NM_001183454.1_JAY291 | cds-NP_014678.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:389585-391954:- | gene-YOR035C_MUCL30387 | rna-NM_001183454.1_MUCL30387 | cds-NP_014678.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:392889-395258:- | gene-YOR035C_MUCL30388 | rna-NM_001183454.1_MUCL30388 | cds-NP_014678.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:384250-386619:- | gene-YOR035C_MUCL39482 | rna-NM_001183454.1_MUCL39482 | cds-NP_014678.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:399064-401433:- | gene-YOR035C_MUCL42920 | rna-NM_001183454.1_MUCL42920 | cds-NP_014678.1_MUCL42920 | 99.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:397624-399993:- | gene-YOR035C_NCIM3186 | rna-NM_001183454.1_NCIM3186 | cds-NP_014678.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:390952-393321:- | gene-YOR035C_NCYC1407 | rna-NM_001183454.1_NCYC1407 | cds-NP_014678.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:389788-392157:- | gene-YOR035C_PE2H3 | rna-NM_001183454.1_PE2H3 | cds-NP_014678.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:400169-402538:- | gene-YOR035C_PE2H4 | rna-NM_001183454.1_PE2H4 | cds-NP_014678.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:397735-400104:- | gene-YOR035C_S288C | rna-NM_001183454.1_S288C | cds-NP_014678.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:365653-368022:- | gene-YOR035C_SA1 | rna-NM_001183454.1_SA1 | cds-NP_014678.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:380662-383031:- | gene-YOR035C_ThermosaccDry | rna-NM_001183454.1_ThermosaccDry | cds-NP_014678.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:381551-383920:- | gene-YOR035C_VR1 | rna-NM_001183454.1_VR1 | cds-NP_014678.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:115289-117658:- | gene-YOR035C_ZTW1 | rna-NM_001183454.1_ZTW1 | cds-NP_014678.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:387979-390348:- | gene-YOR035C_Sparadoxus | rna-NM_001183454.1_Sparadoxus | cds-NP_014678.1_Sparadoxus | 88.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |