Gene name: SHE1
Reference locus (S288C): YBL031W
Gene biotype: protein_coding
Description: Mitotic spindle protein; interacts with components of the Dam1 (DASH) complex, its effector Sli15p, and microtubule-associated protein Bim1p; also localizes to nuclear microtubules and to the bud neck in a ring-shaped structure; inhibits dynein function
Top 10 interactors (score): YHR127W (0.841); YHR131C (0.816); TVP38 (0.765); JNM1 (0.61); ASE1 (0.573); UBA4 (0.573); KAR9 (0.573); MYO4 (0.543); URM1 (0.522); SLK19 (0.522); BIM1 (0.498); SPC34 (0.493); TUB2 (0.487); DYN1 (0.485); TUB1 (0.463); DUO1 (0.455)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:155313-156329:+ | gene-YBL031W_AKU4011 | rna-NM_001178271.1_AKU4011 | cds-NP_009522.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:146134-147150:+ | gene-YBL031W_BG1 | rna-NM_001178271.1_BG1 | cds-NP_009522.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:155897-156913:+ | gene-YBL031W_Bruggeman | rna-NM_001178271.1_Bruggeman | cds-NP_009522.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:158530-159546:+ | gene-YBL031W_CAT1 | rna-NM_001178271.1_CAT1 | cds-NP_009522.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:147872-148888:+ | gene-YBL031W_CBS1585 | rna-NM_001178271.1_CBS1585 | cds-NP_009522.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:156365-157381:+ | gene-YBL031W_CBS436 | rna-NM_001178271.1_CBS436 | cds-NP_009522.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:246628-247644:+ | gene-YBL031W_CBS6412 | rna-NM_001178271.1_CBS6412 | cds-NP_009522.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:153443-154459:+ | gene-YBL031W_CBS6413 | rna-NM_001178271.1_CBS6413 | cds-NP_009522.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:155465-156481:+ | gene-YBL031W_CENPK1137D | rna-NM_001178271.1_CENPK1137D | cds-NP_009522.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:169274-170290:+ | gene-YBL031W_EthanolRed | rna-NM_001178271.1_EthanolRed | cds-NP_009522.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:170121-171137:+ | gene-YBL031W_FaliES1 | rna-NM_001178271.1_FaliES1 | cds-NP_009522.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:72758-73774:+ | gene-YBL031W_JAY291 | rna-NM_001178271.1_JAY291 | cds-NP_009522.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:155525-156541:+ | gene-YBL031W_MUCL30387 | rna-NM_001178271.1_MUCL30387 | cds-NP_009522.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:156547-157563:+ | gene-YBL031W_MUCL30388 | rna-NM_001178271.1_MUCL30388 | cds-NP_009522.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:148047-149063:+ | gene-YBL031W_MUCL39482 | rna-NM_001178271.1_MUCL39482 | cds-NP_009522.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:154861-155877:+ | gene-YBL031W_MUCL42920 | rna-NM_001178271.1_MUCL42920 | cds-NP_009522.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:161496-162512:+ | gene-YBL031W_NCIM3186 | rna-NM_001178271.1_NCIM3186 | cds-NP_009522.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:149184-150200:+ | gene-YBL031W_NCYC1407 | rna-NM_001178271.1_NCYC1407 | cds-NP_009522.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:155435-156451:+ | gene-YBL031W_PE2H3 | rna-NM_001178271.1_PE2H3 | cds-NP_009522.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:153079-154095:+ | gene-YBL031W_PE2H4 | rna-NM_001178271.1_PE2H4 | cds-NP_009522.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:161699-162715:+ | gene-YBL031W_S288C | rna-NM_001178271.1_S288C | cds-NP_009522.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000051.1:46286-47302:+ | gene-YBL031W_SA1 | rna-NM_001178271.1_SA1 | cds-NP_009522.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:170074-171090:+ | gene-YBL031W_ThermosaccDry | rna-NM_001178271.1_ThermosaccDry | cds-NP_009522.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:152264-153280:+ | gene-YBL031W_VR1 | rna-NM_001178271.1_VR1 | cds-NP_009522.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:146794-147810:+ | gene-YBL031W_ZTW1 | rna-NM_001178271.1_ZTW1 | cds-NP_009522.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:181706-182719:+ | gene-YBL031W_Sparadoxus | rna-NM_001178271.1_Sparadoxus | cds-NP_009522.1_Sparadoxus | 89.8 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |