Gene name: SGO1
Reference locus (S288C): YOR073W
Gene biotype: protein_coding
Description: Shugoshin; Component of the spindle checkpoint; involved in sensing lack of tension on mitotic chromosomes; protects centromeric Rec8p at meiosis I; required for accurate chromosomal segregation at meiosis II and for mitotic chromosome stability; recruits condensin to the pericentric region of chromosomes during meiosis; dissociates from pericentromeres when sister kinetochores are under tension; Belongs to the shugoshin family
Top 10 interactors (score): RTS1 (0.993); BUB1 (0.959); ESP1 (0.939); HTA1 (0.917); HTA2 (0.898); HHT2 (0.894); TPD3 (0.893); CSE4 (0.885); PPH22 (0.87); PPH21 (0.869); HHT1 (0.854); CDC55 (0.849); SLI15 (0.844); IML3 (0.838); IPL1 (0.83); CIK1 (0.826); BIR1 (0.824); CDC20 (0.818); BUB3 (0.807); PDS5 (0.8)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:449119-450891:+ | gene-YOR073W_AKU4011 | rna-NM_001183492.1_AKU4011 | cds-NP_014716.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:128806-130578:- | gene-YOR073W_BG1 | rna-NM_001183492.1_BG1 | cds-NP_014716.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:451835-453607:+ | gene-YOR073W_Bruggeman | rna-NM_001183492.1_Bruggeman | cds-NP_014716.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:450604-452376:+ | gene-YOR073W_CAT1 | rna-NM_001183492.1_CAT1 | cds-NP_014716.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:443838-445610:+ | gene-YOR073W_CBS1585 | rna-NM_001183492.1_CBS1585 | cds-NP_014716.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:448635-450407:+ | gene-YOR073W_CBS436 | rna-NM_001183492.1_CBS436 | cds-NP_014716.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:443128-444900:+ | gene-YOR073W_CBS6412 | rna-NM_001183492.1_CBS6412 | cds-NP_014716.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:450445-452217:+ | gene-YOR073W_CBS6413 | rna-NM_001183492.1_CBS6413 | cds-NP_014716.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:464767-466539:+ | gene-YOR073W_CENPK1137D | rna-NM_001183492.1_CENPK1137D | cds-NP_014716.1_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:445830-447602:+ | gene-YOR073W_EthanolRed | rna-NM_001183492.1_EthanolRed | cds-NP_014716.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:449159-450931:+ | gene-YOR073W_FaliES1 | rna-NM_001183492.1_FaliES1 | cds-NP_014716.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000231.1:21056-22828:- | gene-YOR073W_JAY291 | rna-NM_001183492.1_JAY291 | cds-NP_014716.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:456618-458390:+ | gene-YOR073W_MUCL30387 | rna-NM_001183492.1_MUCL30387 | cds-NP_014716.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:461275-463047:+ | gene-YOR073W_MUCL30388 | rna-NM_001183492.1_MUCL30388 | cds-NP_014716.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:451553-453325:+ | gene-YOR073W_MUCL39482 | rna-NM_001183492.1_MUCL39482 | cds-NP_014716.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:467096-468868:+ | gene-YOR073W_MUCL42920 | rna-NM_001183492.1_MUCL42920 | cds-NP_014716.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:464660-466432:+ | gene-YOR073W_NCIM3186 | rna-NM_001183492.1_NCIM3186 | cds-NP_014716.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:458225-459997:+ | gene-YOR073W_NCYC1407 | rna-NM_001183492.1_NCYC1407 | cds-NP_014716.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:456871-458643:+ | gene-YOR073W_PE2H3 | rna-NM_001183492.1_PE2H3 | cds-NP_014716.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:467247-469019:+ | gene-YOR073W_PE2H4 | rna-NM_001183492.1_PE2H4 | cds-NP_014716.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:464771-466543:+ | gene-YOR073W_S288C | rna-NM_001183492.1_S288C | cds-NP_014716.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000091.1:21084-22856:- | gene-YOR073W_SA1 | rna-NM_001183492.1_SA1 | cds-NP_014716.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:448315-450087:+ | gene-YOR073W_ThermosaccDry | rna-NM_001183492.1_ThermosaccDry | cds-NP_014716.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:449809-451581:+ | gene-YOR073W_VR1 | rna-NM_001183492.1_VR1 | cds-NP_014716.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:182312-184084:+ | gene-YOR073W_ZTW1 | rna-NM_001183492.1_ZTW1 | cds-NP_014716.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:453919-455715:+ | gene-YOR073W_Sparadoxus | rna-NM_001183492.1_Sparadoxus | cds-NP_014716.1_Sparadoxus | 88.2 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |