Gene name: SFT1
Reference locus (S288C): YKL006C-A
Gene biotype: protein_coding
Description: Protein transport protein sft1; Intra-Golgi v-SNARE; required for transport of proteins between an early and a later Golgi compartment
Top 10 interactors (score): SED5 (0.999); YKT6 (0.997); SEC22 (0.994); GOS1 (0.994); BET1 (0.993); BOS1 (0.99); VAM3 (0.977); VTI1 (0.973); SSO1 (0.97); NYV1 (0.969); SFT2 (0.96); UFE1 (0.959); SNC1 (0.955); SEC9 (0.946); SEC20 (0.946); SNC2 (0.937); SPO20 (0.918); MSO1 (0.916); TLG1 (0.915); USE1 (0.903)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:416214-416648:- | gene-YKL006C-A_AKU4011 | rna-NM_001180028.3_AKU4011 | cds-NP_012919.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:227254-227689:+ | gene-YKL006C-A_BG1 | rna-NM_001180028.3_BG1 | cds-NP_012919.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:437920-438354:- | gene-YKL006C-A_Bruggeman | rna-NM_001180028.3_Bruggeman | cds-NP_012919.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:433026-433461:- | gene-YKL006C-A_CAT1 | rna-NM_001180028.3_CAT1 | cds-NP_012919.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:428933-429367:- | gene-YKL006C-A_CBS1585 | rna-NM_001180028.3_CBS1585 | cds-NP_012919.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:427796-428231:- | gene-YKL006C-A_CBS436 | rna-NM_001180028.3_CBS436 | cds-NP_012919.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:413090-413524:- | gene-YKL006C-A_CBS6412 | rna-NM_001180028.3_CBS6412 | cds-NP_012919.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:428788-429222:- | gene-YKL006C-A_CBS6413 | rna-NM_001180028.3_CBS6413 | cds-NP_012919.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:429875-430309:- | gene-YKL006C-A_CENPK1137D | rna-NM_001180028.3_CENPK1137D | cds-NP_012919.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:426694-427128:- | gene-YKL006C-A_EthanolRed | rna-NM_001180028.3_EthanolRed | cds-NP_012919.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:428784-429218:- | gene-YKL006C-A_FaliES1 | rna-NM_001180028.3_FaliES1 | cds-NP_012919.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000142.1:1816-2251:+ | gene-YKL006C-A_JAY291 | rna-NM_001180028.3_JAY291 | cds-NP_012919.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:437237-437672:- | gene-YKL006C-A_MUCL30387 | rna-NM_001180028.3_MUCL30387 | cds-NP_012919.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:432844-433279:- | gene-YKL006C-A_MUCL30388 | rna-NM_001180028.3_MUCL30388 | cds-NP_012919.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:428250-428684:- | gene-YKL006C-A_MUCL39482 | rna-NM_001180028.3_MUCL39482 | cds-NP_012919.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:434081-434516:- | gene-YKL006C-A_MUCL42920 | rna-NM_001180028.3_MUCL42920 | cds-NP_012919.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:430187-430621:- | gene-YKL006C-A_NCIM3186 | rna-NM_001180028.3_NCIM3186 | cds-NP_012919.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:428443-428877:- | gene-YKL006C-A_NCYC1407 | rna-NM_001180028.3_NCYC1407 | cds-NP_012919.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:453134-453569:- | gene-YKL006C-A_PE2H3 | rna-NM_001180028.3_PE2H3 | cds-NP_012919.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:437875-438310:- | gene-YKL006C-A_PE2H4 | rna-NM_001180028.3_PE2H4 | cds-NP_012919.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:430198-430632:- | gene-YKL006C-A_S288C | rna-NM_001180028.3_S288C | cds-NP_012919.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000027.1:108478-108912:- | gene-YKL006C-A_SA1 | rna-NM_001180028.3_SA1 | cds-NP_012919.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:428883-429317:- | gene-YKL006C-A_ThermosaccDry | rna-NM_001180028.3_ThermosaccDry | cds-NP_012919.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:428156-428591:- | gene-YKL006C-A_VR1 | rna-NM_001180028.3_VR1 | cds-NP_012919.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:426929-427363:- | gene-YKL006C-A_ZTW1 | rna-NM_001180028.3_ZTW1 | cds-NP_012919.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:451902-452338:- | gene-YKL006C-A_Sparadoxus | rna-NM_001180028.3_Sparadoxus | cds-NP_012919.3_Sparadoxus | 91.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |