SFH5 (YJL145W)


Gene profile

Gene name: SFH5
Reference locus (S288C): YJL145W
Gene biotype: protein_coding

Description: Non-classical phosphatidylinositol transfer protein (PITP); exhibits PI- but not PC-transfer activity; localizes to the peripheral endoplasmic reticulum, cytosol and microsomes; similar to Sec14p; partially relocalizes to the plasma membrane upon DNA replication stress

Top 10 interactors (score): SEC14 (0.97); CSR1 (0.925); PDR17 (0.923); PDR16 (0.885); STT4 (0.863); SPO14 (0.74); DDI1 (0.73); MSS4 (0.657); SCS2 (0.631); PIK1 (0.585); BNI1 (0.488); BNR1 (0.488); SEC3 (0.468); SEC8 (0.451); PDR8 (0.438); KES1 (0.412); PLB1 (0.41)

Homologues (species, bitscore): Ttpal (Mus musculus, 52.0); AT3G51670 (Arabidopsis thaliana, 91.3)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:133455-134339:+ gene-YJL145W_AKU4011 rna-NM_001181578.1_AKU4011 cds-NP_012390.1_AKU4011 99.2 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:479380-480264:- gene-YJL145W_BG1 rna-NM_001181578.1_BG1 cds-NP_012390.1_BG1 99.0 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:145290-146174:+ gene-YJL145W_Bruggeman rna-NM_001181578.1_Bruggeman cds-NP_012390.1_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:149078-149962:+ gene-YJL145W_CAT1 rna-NM_001181578.1_CAT1 cds-NP_012390.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:139089-139973:+ gene-YJL145W_CBS1585 rna-NM_001181578.1_CBS1585 cds-NP_012390.1_CBS1585 99.2 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:163840-164724:+ gene-YJL145W_CBS436 rna-NM_001181578.1_CBS436 cds-NP_012390.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:135498-136382:+ gene-YJL145W_CBS6412 rna-NM_001181578.1_CBS6412 cds-NP_012390.1_CBS6412 98.9 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:136562-137446:+ gene-YJL145W_CBS6413 rna-NM_001181578.1_CBS6413 cds-NP_012390.1_CBS6413 98.8 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:127549-128433:+ gene-YJL145W_CENPK1137D rna-NM_001181578.1_CENPK1137D cds-NP_012390.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:137613-138497:+ gene-YJL145W_EthanolRed rna-NM_001181578.1_EthanolRed cds-NP_012390.1_EthanolRed 98.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:143091-143975:+ gene-YJL145W_FaliES1 rna-NM_001181578.1_FaliES1 cds-NP_012390.1_FaliES1 99.0 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000099.1:24271-25155:+ gene-YJL145W_JAY291 rna-NM_001181578.1_JAY291 cds-NP_012390.1_JAY291 99.0 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:147559-148443:+ gene-YJL145W_MUCL30387 rna-NM_001181578.1_MUCL30387 cds-NP_012390.1_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:143611-144495:+ gene-YJL145W_MUCL30388 rna-NM_001181578.1_MUCL30388 cds-NP_012390.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:137831-138715:+ gene-YJL145W_MUCL39482 rna-NM_001181578.1_MUCL39482 cds-NP_012390.1_MUCL39482 99.2 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:143350-144234:+ gene-YJL145W_MUCL42920 rna-NM_001181578.1_MUCL42920 cds-NP_012390.1_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:145139-146023:+ gene-YJL145W_NCIM3186 rna-NM_001181578.1_NCIM3186 cds-NP_012390.1_NCIM3186 99.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:136440-137324:+ gene-YJL145W_NCYC1407 rna-NM_001181578.1_NCYC1407 cds-NP_012390.1_NCYC1407 98.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:149249-150133:+ gene-YJL145W_PE2H3 rna-NM_001181578.1_PE2H3 cds-NP_012390.1_PE2H3 99.0 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:148891-149775:+ gene-YJL145W_PE2H4 rna-NM_001181578.1_PE2H4 cds-NP_012390.1_PE2H4 99.0 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:145160-146044:+ gene-YJL145W_S288C rna-NM_001181578.1_S288C cds-NP_012390.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000022.1:7570-8454:- gene-YJL145W_SA1 rna-NM_001181578.1_SA1 cds-NP_012390.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:136282-137166:+ gene-YJL145W_ThermosaccDry rna-NM_001181578.1_ThermosaccDry cds-NP_012390.1_ThermosaccDry 98.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:143366-144250:+ gene-YJL145W_VR1 rna-NM_001181578.1_VR1 cds-NP_012390.1_VR1 99.0 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:123571-124455:+ gene-YJL145W_ZTW1 rna-NM_001181578.1_ZTW1 cds-NP_012390.1_ZTW1 99.4 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:148852-149736:+ gene-YJL145W_Sparadoxus rna-NM_001181578.1_Sparadoxus cds-NP_012390.1_Sparadoxus 88.1 99.8 Verified 1 1 1 False True False False False

Additional files