Gene name: SFC1
Reference locus (S288C): YJR095W
Gene biotype: protein_coding
Description: Solute carrier family 25 (mitochondrial citrate transporter), member 1; Mitochondrial succinate-fumarate transporter; transports succinate into and fumarate out of the mitochondrion; required for ethanol and acetate utilization
Top 10 interactors (score): PCK1 (0.986); FBP1 (0.982); MLS1 (0.981); IDP2 (0.979); ICL1 (0.969); ACS1 (0.9); JEN1 (0.898); CAT2 (0.863); YAT2 (0.798); FUM1 (0.791); CIT3 (0.778); ADY2 (0.766); ACH1 (0.761); SIP4 (0.76); CRC1 (0.703); MDH2 (0.703); AGX1 (0.682); ADH2 (0.665); MAE1 (0.656); LSC1 (0.654)
Homologues (species, bitscore): SLC25A1 (Homo sapiens, 172.2); Slc25a1 (Mus musculus, 166.8); slc25a1b (Danio rerio, 162.9); slc25a1 (Xenopus tropicalis, 158.3); sea (Drosophila melanogaster, 158.7); K11H3.3 (Caenorhabditis elegans, 157.5); mSFC1 (Arabidopsis thaliana, 184.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:581273-582241:+ | gene-YJR095W_AKU4011 | rna-NM_001181753.1_AKU4011 | cds-NP_012629.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:25332-26300:- | gene-YJR095W_BG1 | rna-NM_001181753.1_BG1 | cds-NP_012629.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:597006-597974:+ | gene-YJR095W_Bruggeman | rna-NM_001181753.1_Bruggeman | cds-NP_012629.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:599426-600394:+ | gene-YJR095W_CAT1 | rna-NM_001181753.1_CAT1 | cds-NP_012629.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:593337-594305:+ | gene-YJR095W_CBS1585 | rna-NM_001181753.1_CBS1585 | cds-NP_012629.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:611444-612412:+ | gene-YJR095W_CBS436 | rna-NM_001181753.1_CBS436 | cds-NP_012629.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:580484-581452:+ | gene-YJR095W_CBS6412 | rna-NM_001181753.1_CBS6412 | cds-NP_012629.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:582779-583747:+ | gene-YJR095W_CBS6413 | rna-NM_001181753.1_CBS6413 | cds-NP_012629.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:592096-593064:+ | gene-YJR095W_CENPK1137D | rna-NM_001181753.1_CENPK1137D | cds-NP_012629.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:585692-586660:+ | gene-YJR095W_EthanolRed | rna-NM_001181753.1_EthanolRed | cds-NP_012629.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:597158-598126:+ | gene-YJR095W_FaliES1 | rna-NM_001181753.1_FaliES1 | cds-NP_012629.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:91293-92261:- | gene-YJR095W_JAY291 | rna-NM_001181753.1_JAY291 | cds-NP_012629.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:595311-596279:+ | gene-YJR095W_MUCL30387 | rna-NM_001181753.1_MUCL30387 | cds-NP_012629.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:592622-593590:+ | gene-YJR095W_MUCL30388 | rna-NM_001181753.1_MUCL30388 | cds-NP_012629.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:586797-587765:+ | gene-YJR095W_MUCL39482 | rna-NM_001181753.1_MUCL39482 | cds-NP_012629.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:591052-592020:+ | gene-YJR095W_MUCL42920 | rna-NM_001181753.1_MUCL42920 | cds-NP_012629.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:609752-610720:+ | gene-YJR095W_NCIM3186 | rna-NM_001181753.1_NCIM3186 | cds-NP_012629.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:584363-585331:+ | gene-YJR095W_NCYC1407 | rna-NM_001181753.1_NCYC1407 | cds-NP_012629.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:602256-603224:+ | gene-YJR095W_PE2H3 | rna-NM_001181753.1_PE2H3 | cds-NP_012629.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:595945-596913:+ | gene-YJR095W_PE2H4 | rna-NM_001181753.1_PE2H4 | cds-NP_012629.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:609773-610741:+ | gene-YJR095W_S288C | rna-NM_001181753.1_S288C | cds-NP_012629.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000038.1:68343-69311:+ | gene-YJR095W_SA1 | rna-NM_001181753.1_SA1 | cds-NP_012629.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:591092-592060:+ | gene-YJR095W_ThermosaccDry | rna-NM_001181753.1_ThermosaccDry | cds-NP_012629.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:593217-594185:+ | gene-YJR095W_VR1 | rna-NM_001181753.1_VR1 | cds-NP_012629.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:570458-571426:+ | gene-YJR095W_ZTW1 | rna-NM_001181753.1_ZTW1 | cds-NP_012629.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:603952-604920:+ | gene-YJR095W_Sparadoxus | rna-NM_001181753.1_Sparadoxus | cds-NP_012629.1_Sparadoxus | 93.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |