Gene name: SET4
Reference locus (S288C): YJL105W
Gene biotype: protein_coding
Description: Set domain-containing protein 4; Protein of unknown function, contains a SET domain; SET4 has a paralog, SET3, that arose from the whole genome duplication
Top 10 interactors (score): SET1 (0.983); SET6 (0.93); SET5 (0.914); SET2 (0.854); EFM1 (0.751); SFM1 (0.744); SIF2 (0.738); RKM1 (0.706); YGR283C (0.702); CTM1 (0.674); YMR310C (0.674); SNT1 (0.671); HOS2 (0.653); AIM4 (0.617); ECM5 (0.614); YKR011C (0.597); JHD2 (0.583); ISW1 (0.574); YPR003C (0.573); YDR222W (0.573)
Homologues (species, bitscore): KMT2E (Homo sapiens, 55.1); Kmt2e (Mus musculus, 51.2); kmt2e (Danio rerio, 62.8); kmt2e (Xenopus tropicalis, 60.5); Mes-4 (Drosophila melanogaster, 52.8); mes-4 (Caenorhabditis elegans, 50.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:207792-209474:+ | gene-YJL105W_AKU4011 | rna-NM_001181538.1_AKU4011 | cds-NP_012430.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:404977-406659:- | gene-YJL105W_BG1 | rna-NM_001181538.1_BG1 | cds-NP_012430.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:219220-220902:+ | gene-YJL105W_Bruggeman | rna-NM_001181538.1_Bruggeman | cds-NP_012430.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:224134-225816:+ | gene-YJL105W_CAT1 | rna-NM_001181538.1_CAT1 | cds-NP_012430.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:219453-221135:+ | gene-YJL105W_CBS1585 | rna-NM_001181538.1_CBS1585 | cds-NP_012430.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:237544-239226:+ | gene-YJL105W_CBS436 | rna-NM_001181538.1_CBS436 | cds-NP_012430.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:208549-210231:+ | gene-YJL105W_CBS6412 | rna-NM_001181538.1_CBS6412 | cds-NP_012430.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:209905-211587:+ | gene-YJL105W_CBS6413 | rna-NM_001181538.1_CBS6413 | cds-NP_012430.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:207511-209193:+ | gene-YJL105W_CENPK1137D | rna-NM_001181538.1_CENPK1137D | cds-NP_012430.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:211641-213323:+ | gene-YJL105W_EthanolRed | rna-NM_001181538.1_EthanolRed | cds-NP_012430.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:223218-224900:+ | gene-YJL105W_FaliES1 | rna-NM_001181538.1_FaliES1 | cds-NP_012430.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000138.1:20836-22518:+ | gene-YJL105W_JAY291 | rna-NM_001181538.1_JAY291 | cds-NP_012430.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:221487-223169:+ | gene-YJL105W_MUCL30387 | rna-NM_001181538.1_MUCL30387 | cds-NP_012430.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:217566-219248:+ | gene-YJL105W_MUCL30388 | rna-NM_001181538.1_MUCL30388 | cds-NP_012430.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:212210-213892:+ | gene-YJL105W_MUCL39482 | rna-NM_001181538.1_MUCL39482 | cds-NP_012430.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:218395-220077:+ | gene-YJL105W_MUCL42920 | rna-NM_001181538.1_MUCL42920 | cds-NP_012430.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:225034-226716:+ | gene-YJL105W_NCIM3186 | rna-NM_001181538.1_NCIM3186 | cds-NP_012430.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:210900-212582:+ | gene-YJL105W_NCYC1407 | rna-NM_001181538.1_NCYC1407 | cds-NP_012430.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:223261-224943:+ | gene-YJL105W_PE2H3 | rna-NM_001181538.1_PE2H3 | cds-NP_012430.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:222905-224587:+ | gene-YJL105W_PE2H4 | rna-NM_001181538.1_PE2H4 | cds-NP_012430.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:225055-226737:+ | gene-YJL105W_S288C | rna-NM_001181538.1_S288C | cds-NP_012430.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:20778-22460:+ | gene-YJL105W_SA1 | rna-NM_001181538.1_SA1 | cds-NP_012430.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:216627-218309:+ | gene-YJL105W_ThermosaccDry | rna-NM_001181538.1_ThermosaccDry | cds-NP_012430.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:217040-218722:+ | gene-YJL105W_VR1 | rna-NM_001181538.1_VR1 | cds-NP_012430.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:197987-199669:+ | gene-YJL105W_ZTW1 | rna-NM_001181538.1_ZTW1 | cds-NP_012430.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:222078-223751:+ | gene-YJL105W_Sparadoxus | rna-NM_001181538.1_Sparadoxus | cds-NP_012430.1_Sparadoxus | 88.9 | 99.4 | Verified | 1 | 1 | 0 | False | False | False | True | False |