Gene name: SES1
Reference locus (S288C): YDR023W
Gene biotype: protein_coding
Description: Serine--tRNA ligase, cytoplasmic; Cytosolic seryl-tRNA synthetase; class II aminoacyl-tRNA synthetase that aminoacylates tRNA(Ser), displays tRNA-dependent amino acid recognition which enhances discrimination of the serine substrate, interacts with peroxin Pex21p
Top 10 interactors (score): GRS1 (0.994); YNL247W (0.993); TYS1 (0.992); YDR341C (0.989); CDC60 (0.988); THS1 (0.983); NAM2 (0.978); MES1 (0.976); ALA1 (0.972); GUS1 (0.969); PEX21 (0.966); IDH2 (0.962); ILS1 (0.955); GLN4 (0.955); WRS1 (0.953); MSR1 (0.949); GRS2 (0.948); ASC1 (0.939); KRS1 (0.939); DED81 (0.931)
Homologues (species, bitscore): SARS (Homo sapiens, 414.1); Sars (Mus musculus, 406.0); sars (Danio rerio, 417.2); sars (Xenopus tropicalis, 351.7); CG17259 (Drosophila melanogaster, 402.9); sars-1 (Caenorhabditis elegans, 416.0); AT5G27470 (Arabidopsis thaliana, 471.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:475427-476815:+ | gene-YDR023W_AKU4011 | rna-NM_001180331.1_AKU4011 | cds-NP_010306.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:72987-74375:- | gene-YDR023W_BG1 | rna-NM_001180331.1_BG1 | cds-NP_010306.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:503668-505056:+ | gene-YDR023W_Bruggeman | rna-NM_001180331.1_Bruggeman | cds-NP_010306.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:488743-490131:+ | gene-YDR023W_CAT1 | rna-NM_001180331.1_CAT1 | cds-NP_010306.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:472016-473404:+ | gene-YDR023W_CBS1585 | rna-NM_001180331.1_CBS1585 | cds-NP_010306.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:489006-490394:+ | gene-YDR023W_CBS436 | rna-NM_001180331.1_CBS436 | cds-NP_010306.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:468928-470316:+ | gene-YDR023W_CBS6412 | rna-NM_001180331.1_CBS6412 | cds-NP_010306.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:491205-492593:+ | gene-YDR023W_CBS6413 | rna-NM_001180331.1_CBS6413 | cds-NP_010306.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:488473-489861:+ | gene-YDR023W_CENPK1137D | rna-NM_001180331.1_CENPK1137D | cds-NP_010306.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:483451-484839:+ | gene-YDR023W_EthanolRed | rna-NM_001180331.1_EthanolRed | cds-NP_010306.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:489808-491196:+ | gene-YDR023W_FaliES1 | rna-NM_001180331.1_FaliES1 | cds-NP_010306.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000042.1:22392-23780:- | gene-YDR023W_JAY291 | rna-NM_001180331.1_JAY291 | cds-NP_010306.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:489252-490640:+ | gene-YDR023W_MUCL30387 | rna-NM_001180331.1_MUCL30387 | cds-NP_010306.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:479713-481101:+ | gene-YDR023W_MUCL30388 | rna-NM_001180331.1_MUCL30388 | cds-NP_010306.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:473384-474772:+ | gene-YDR023W_MUCL39482 | rna-NM_001180331.1_MUCL39482 | cds-NP_010306.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:395042-396430:+ | gene-YDR023W_MUCL42920 | rna-NM_001180331.1_MUCL42920 | cds-NP_010306.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:489431-490819:+ | gene-YDR023W_NCIM3186 | rna-NM_001180331.1_NCIM3186 | cds-NP_010306.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:472817-474205:+ | gene-YDR023W_NCYC1407 | rna-NM_001180331.1_NCYC1407 | cds-NP_010306.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:487912-489300:+ | gene-YDR023W_PE2H3 | rna-NM_001180331.1_PE2H3 | cds-NP_010306.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:487217-488605:+ | gene-YDR023W_PE2H4 | rna-NM_001180331.1_PE2H4 | cds-NP_010306.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:489508-490896:+ | gene-YDR023W_S288C | rna-NM_001180331.1_S288C | cds-NP_010306.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000065.1:16677-18065:+ | gene-YDR023W_SA1 | rna-NM_001180331.1_SA1 | cds-NP_010306.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:489286-490674:+ | gene-YDR023W_ThermosaccDry | rna-NM_001180331.1_ThermosaccDry | cds-NP_010306.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:493850-495238:+ | gene-YDR023W_VR1 | rna-NM_001180331.1_VR1 | cds-NP_010306.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:487182-488570:+ | gene-YDR023W_ZTW1 | rna-NM_001180331.1_ZTW1 | cds-NP_010306.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:491649-493037:+ | gene-YDR023W_Sparadoxus | rna-NM_001180331.1_Sparadoxus | cds-NP_010306.1_Sparadoxus | 92.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |