Gene name: SER2
Reference locus (S288C): YGR208W
Gene biotype: protein_coding
Description: Phosphoserine phosphatase of the phosphoglycerate pathway; involved in serine and glycine biosynthesis, expression is regulated by the available nitrogen source; Belongs to the HAD-like hydrolase superfamily. SerB family
Top 10 interactors (score): SER1 (0.998); THR4 (0.991); SHM2 (0.989); TYR1 (0.989); PCF11 (0.984); SHM1 (0.982); PRO3 (0.98); AGX1 (0.977); RTT103 (0.958); CYS4 (0.948); RPO21 (0.946); SGV1 (0.928); TRP5 (0.927); CHA1 (0.927); ILV1 (0.927); CTK1 (0.921); SER33 (0.921); SER3 (0.92); CHO1 (0.918); FCP1 (0.909)
Homologues (species, bitscore): PSPH (Homo sapiens, 79.0); Psph (Mus musculus, 79.7); psph (Danio rerio, 69.7); psph (Xenopus tropicalis, 79.3); aay (Drosophila melanogaster, 62.0); Y62E10A.13 (Caenorhabditis elegans, 73.9); PSP (Arabidopsis thaliana, 62.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:877402-878331:+ | gene-YGR208W_AKU4011 | rna-NM_001181337.1_AKU4011 | cds-NP_011724.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:157783-158712:+ | gene-YGR208W_BG1 | rna-NM_001181337.1_BG1 | cds-NP_011724.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:885601-886530:+ | gene-YGR208W_Bruggeman | rna-NM_001181337.1_Bruggeman | cds-NP_011724.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:883594-884523:+ | gene-YGR208W_CAT1 | rna-NM_001181337.1_CAT1 | cds-NP_011724.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:880840-881769:+ | gene-YGR208W_CBS1585 | rna-NM_001181337.1_CBS1585 | cds-NP_011724.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:884191-885120:+ | gene-YGR208W_CBS436 | rna-NM_001181337.1_CBS436 | cds-NP_011724.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:871712-872641:+ | gene-YGR208W_CBS6412 | rna-NM_001181337.1_CBS6412 | cds-NP_011724.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:877771-878700:+ | gene-YGR208W_CBS6413 | rna-NM_001181337.1_CBS6413 | cds-NP_011724.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:911595-912524:+ | gene-YGR208W_CENPK1137D | rna-NM_001181337.1_CENPK1137D | cds-NP_011724.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:866221-867150:+ | gene-YGR208W_EthanolRed | rna-NM_001181337.1_EthanolRed | cds-NP_011724.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:870612-871541:+ | gene-YGR208W_FaliES1 | rna-NM_001181337.1_FaliES1 | cds-NP_011724.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000148.1:28336-29265:+ | gene-YGR208W_JAY291 | rna-NM_001181337.1_JAY291 | cds-NP_011724.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:883086-884015:+ | gene-YGR208W_MUCL30387 | rna-NM_001181337.1_MUCL30387 | cds-NP_011724.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:882770-883699:+ | gene-YGR208W_MUCL30388 | rna-NM_001181337.1_MUCL30388 | cds-NP_011724.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:875916-876845:+ | gene-YGR208W_MUCL39482 | rna-NM_001181337.1_MUCL39482 | cds-NP_011724.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:893462-894391:+ | gene-YGR208W_MUCL42920 | rna-NM_001181337.1_MUCL42920 | cds-NP_011724.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:911883-912812:+ | gene-YGR208W_NCIM3186 | rna-NM_001181337.1_NCIM3186 | cds-NP_011724.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:871572-872501:+ | gene-YGR208W_NCYC1407 | rna-NM_001181337.1_NCYC1407 | cds-NP_011724.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:896178-897107:+ | gene-YGR208W_PE2H3 | rna-NM_001181337.1_PE2H3 | cds-NP_011724.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:901288-902217:+ | gene-YGR208W_PE2H4 | rna-NM_001181337.1_PE2H4 | cds-NP_011724.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:911883-912812:+ | gene-YGR208W_S288C | rna-NM_001181337.1_S288C | cds-NP_011724.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000045.1:88579-89508:- | gene-YGR208W_SA1 | rna-NM_001181337.1_SA1 | cds-NP_011724.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:891123-892052:+ | gene-YGR208W_ThermosaccDry | rna-NM_001181337.1_ThermosaccDry | cds-NP_011724.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:995606-996535:+ | gene-YGR208W_VR1 | rna-NM_001181337.1_VR1 | cds-NP_011724.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:192565-193494:+ | gene-YGR208W_ZTW1 | rna-NM_001181337.1_ZTW1 | cds-NP_011724.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:883059-883988:+ | gene-YGR208W_Sparadoxus | rna-NM_001181337.1_Sparadoxus | cds-NP_011724.1_Sparadoxus | 88.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |