Gene name: SEO1
Reference locus (S288C): YAL067C
Gene biotype: protein_coding
Description: Probable transporter SEO1; Putative permease; member of the allantoate transporter subfamily of the major facilitator superfamily; mutation confers resistance to ethionine sulfoxide
Top 10 interactors (score): YBL010C (0.816); YFR056C (0.779); LDS1 (0.776); JLP1 (0.761); YOL163W (0.727); YAL065C (0.712); COS12 (0.695); AGP3 (0.652); MUP1 (0.643); AMD2 (0.626); DUR3 (0.623); OPT2 (0.619); PAU8 (0.616); DUR1,2 (0.612); YOL162W (0.591); MUP3 (0.581); STR3 (0.577); YSA1 (0.572); ANS1 (0.561); YBR139W (0.556)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:6052-7833:- | gene-YAL067C_AKU4011 | rna-NM_001178208.1_AKU4011 | cds-NP_009333.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000116.1:508-2291:- | gene-YAL067C_BG1 | rna-NM_001178208.1_BG1 | cds-NP_009333.1_BG1 | 98.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:6568-8349:- | gene-YAL067C_Bruggeman | rna-NM_001178208.1_Bruggeman | cds-NP_009333.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:5111-6892:- | gene-YAL067C_CAT1 | rna-NM_001178208.1_CAT1 | cds-NP_009333.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:6475-8256:- | gene-YAL067C_CBS1585 | rna-NM_001178208.1_CBS1585 | cds-NP_009333.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:5357-7138:- | gene-YAL067C_CBS436 | rna-NM_001178208.1_CBS436 | cds-NP_009333.1_CBS436 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:5168-6949:- | gene-YAL067C_CBS6412 | rna-NM_001178208.1_CBS6412 | cds-NP_009333.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:5034-6815:- | gene-YAL067C_CBS6413 | rna-NM_001178208.1_CBS6413 | cds-NP_009333.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:7359-9140:- | gene-YAL067C_EthanolRed | rna-NM_001178208.1_EthanolRed | cds-NP_009333.1_EthanolRed | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:7992-9773:- | gene-YAL067C_FaliES1 | rna-NM_001178208.1_FaliES1 | cds-NP_009333.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000342.1:2742-4523:+ | gene-YAL067C_JAY291 | rna-NM_001178208.1_JAY291 | cds-NP_009333.1_JAY291 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:7296-9077:- | gene-YAL067C_MUCL30387 | rna-NM_001178208.1_MUCL30387 | cds-NP_009333.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:6022-7803:- | gene-YAL067C_MUCL30388 | rna-NM_001178208.1_MUCL30388 | cds-NP_009333.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:5271-7052:- | gene-YAL067C_MUCL39482 | rna-NM_001178208.1_MUCL39482 | cds-NP_009333.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:5920-7701:- | gene-YAL067C_MUCL42920 | rna-NM_001178208.1_MUCL42920 | cds-NP_009333.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:7112-8893:- | gene-YAL067C_NCIM3186 | rna-NM_001178208.1_NCIM3186 | cds-NP_009333.1_NCIM3186 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:5595-7376:- | gene-YAL067C_NCYC1407 | rna-NM_001178208.1_NCYC1407 | cds-NP_009333.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:196637-198418:+ | gene-YAL067C_PE2H3 | rna-NM_001178208.1_PE2H3 | cds-NP_009333.1_PE2H3 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:196356-198137:+ | gene-YAL067C_PE2H4 | rna-NM_001178208.1_PE2H4 | cds-NP_009333.1_PE2H4 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:7235-9016:- | gene-YAL067C_S288C | rna-NM_001178208.1_S288C | cds-NP_009333.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000148.1:1-850:- | gene-YAL067C_SA1 | rna-NM_001178208.1_SA1 | cds-NP_009333.1_SA1 | 47.6 | 47.6 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:8071-9852:- | gene-YAL067C_ThermosaccDry | rna-NM_001178208.1_ThermosaccDry | cds-NP_009333.1_ThermosaccDry | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:7676-9457:- | gene-YAL067C_VR1 | rna-NM_001178208.1_VR1 | cds-NP_009333.1_VR1 | 97.8 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000001.1:12845-14626:- | gene-YAL067C_ZTW1 | rna-NM_001178208.1_ZTW1 | cds-NP_009333.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:9856-11637:- | gene-YAL067C_Sparadoxus | rna-NM_001178208.1_Sparadoxus | cds-NP_009333.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |