Gene name: SEF1
Reference locus (S288C): YBL066C
Gene biotype: protein_coding
Description: Putative transcription factor sef1; Putative transcription factor; has homolog in Kluyveromyces lactis
Top 10 interactors (score): AFT1 (0.789); YAP5 (0.773); FTR1 (0.746); MRX10 (0.712); RIM101 (0.708); SIT1 (0.686); UPC2 (0.679); SSN3 (0.652); MSS116 (0.6); CCC1 (0.589); TIS11 (0.574); YBL065W (0.567); ECM9 (0.565); VHS1 (0.562); HMS1 (0.526); RPM2 (0.515); RRT8 (0.499); IDP1 (0.48); LSM2 (0.479); MRS4 (0.475)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:90248-93694:- | gene-YBL066C_AKU4011 | rna-NM_001178306.1_AKU4011 | cds-NP_009487.2_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:81106-84552:- | gene-YBL066C_BG1 | rna-NM_001178306.1_BG1 | cds-NP_009487.2_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:90863-94309:- | gene-YBL066C_Bruggeman | rna-NM_001178306.1_Bruggeman | cds-NP_009487.2_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:93501-96947:- | gene-YBL066C_CAT1 | rna-NM_001178306.1_CAT1 | cds-NP_009487.2_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:82815-86261:- | gene-YBL066C_CBS1585 | rna-NM_001178306.1_CBS1585 | cds-NP_009487.2_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:91323-94769:- | gene-YBL066C_CBS436 | rna-NM_001178306.1_CBS436 | cds-NP_009487.2_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:81321-84767:- | gene-YBL066C_CBS6412 | rna-NM_001178306.1_CBS6412 | cds-NP_009487.2_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:88393-91839:- | gene-YBL066C_CBS6413 | rna-NM_001178306.1_CBS6413 | cds-NP_009487.2_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:90426-93872:- | gene-YBL066C_CENPK1137D | rna-NM_001178306.1_CENPK1137D | cds-NP_009487.2_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:104247-107693:- | gene-YBL066C_EthanolRed | rna-NM_001178306.1_EthanolRed | cds-NP_009487.2_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:105100-108546:- | gene-YBL066C_FaliES1 | rna-NM_001178306.1_FaliES1 | cds-NP_009487.2_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:7721-11167:- | gene-YBL066C_JAY291 | rna-NM_001178306.1_JAY291 | cds-NP_009487.2_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:90237-93683:- | gene-YBL066C_MUCL30387 | rna-NM_001178306.1_MUCL30387 | cds-NP_009487.2_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:91515-94961:- | gene-YBL066C_MUCL30388 | rna-NM_001178306.1_MUCL30388 | cds-NP_009487.2_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:82996-86442:- | gene-YBL066C_MUCL39482 | rna-NM_001178306.1_MUCL39482 | cds-NP_009487.2_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:89832-93278:- | gene-YBL066C_MUCL42920 | rna-NM_001178306.1_MUCL42920 | cds-NP_009487.2_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:96466-99912:- | gene-YBL066C_NCIM3186 | rna-NM_001178306.1_NCIM3186 | cds-NP_009487.2_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:84138-87584:- | gene-YBL066C_NCYC1407 | rna-NM_001178306.1_NCYC1407 | cds-NP_009487.2_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:90396-93842:- | gene-YBL066C_PE2H3 | rna-NM_001178306.1_PE2H3 | cds-NP_009487.2_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:88040-91486:- | gene-YBL066C_PE2H4 | rna-NM_001178306.1_PE2H4 | cds-NP_009487.2_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:96669-100115:- | gene-YBL066C_S288C | rna-NM_001178306.1_S288C | cds-NP_009487.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:80775-84221:- | gene-YBL066C_SA1 | rna-NM_001178306.1_SA1 | cds-NP_009487.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:105061-108507:- | gene-YBL066C_ThermosaccDry | rna-NM_001178306.1_ThermosaccDry | cds-NP_009487.2_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:87228-90674:- | gene-YBL066C_VR1 | rna-NM_001178306.1_VR1 | cds-NP_009487.2_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:81778-85224:- | gene-YBL066C_ZTW1 | rna-NM_001178306.1_ZTW1 | cds-NP_009487.2_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:116455-119895:- | gene-YBL066C_Sparadoxus | rna-NM_001178306.1_Sparadoxus | cds-NP_009487.2_Sparadoxus | 88.6 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |