Gene name: SEC72
Reference locus (S288C): YLR292C
Gene biotype: protein_coding
Description: Translocation protein SEC72; Non-essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and import into the ER; other members are Sec63p, Sec62p, and Sec66p
Top 10 interactors (score): SEC63 (0.999); SEC66 (0.999); SEC62 (0.999); SEC61 (0.998); SBH1 (0.997); SSS1 (0.99); KAR2 (0.91); SBH2 (0.895); HRI1 (0.872); MNN2 (0.735); SRP102 (0.729); JEM1 (0.712); LHS1 (0.711); STE24 (0.705); YDL121C (0.63); KAR5 (0.615); UTH1 (0.599); SPF1 (0.592); YDJ1 (0.59); SIL1 (0.572)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:668591-669172:- | gene-YLR292C_AKU4011 | rna-NM_001182180.1_AKU4011 | cds-NP_013395.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:63519-64100:+ | gene-YLR292C_BG1 | rna-NM_001182180.1_BG1 | cds-NP_013395.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:703771-704352:- | gene-YLR292C_Bruggeman | rna-NM_001182180.1_Bruggeman | cds-NP_013395.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:702339-702920:- | gene-YLR292C_CAT1 | rna-NM_001182180.1_CAT1 | cds-NP_013395.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:703527-704108:- | gene-YLR292C_CBS1585 | rna-NM_001182180.1_CBS1585 | cds-NP_013395.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:688118-688699:- | gene-YLR292C_CBS436 | rna-NM_001182180.1_CBS436 | cds-NP_013395.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:666160-666741:- | gene-YLR292C_CBS6412 | rna-NM_001182180.1_CBS6412 | cds-NP_013395.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:704192-704773:- | gene-YLR292C_CBS6413 | rna-NM_001182180.1_CBS6413 | cds-NP_013395.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:704386-704967:- | gene-YLR292C_CENPK1137D | rna-NM_001182180.1_CENPK1137D | cds-NP_013395.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:661870-662451:- | gene-YLR292C_EthanolRed | rna-NM_001182180.1_EthanolRed | cds-NP_013395.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:691070-691651:- | gene-YLR292C_FaliES1 | rna-NM_001182180.1_FaliES1 | cds-NP_013395.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000359.1:14121-14702:+ | gene-YLR292C_JAY291 | rna-NM_001182180.1_JAY291 | cds-NP_013395.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:703662-704243:- | gene-YLR292C_MUCL30387 | rna-NM_001182180.1_MUCL30387 | cds-NP_013395.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:709245-709826:- | gene-YLR292C_MUCL30388 | rna-NM_001182180.1_MUCL30388 | cds-NP_013395.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:704758-705339:- | gene-YLR292C_MUCL39482 | rna-NM_001182180.1_MUCL39482 | cds-NP_013395.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:699913-700494:- | gene-YLR292C_MUCL42920 | rna-NM_001182180.1_MUCL42920 | cds-NP_013395.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:719763-720344:- | gene-YLR292C_NCIM3186 | rna-NM_001182180.1_NCIM3186 | cds-NP_013395.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:714089-714670:- | gene-YLR292C_NCYC1407 | rna-NM_001182180.1_NCYC1407 | cds-NP_013395.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:701885-702466:- | gene-YLR292C_PE2H3 | rna-NM_001182180.1_PE2H3 | cds-NP_013395.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:701629-702210:- | gene-YLR292C_PE2H4 | rna-NM_001182180.1_PE2H4 | cds-NP_013395.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:719789-720370:- | gene-YLR292C_S288C | rna-NM_001182180.1_S288C | cds-NP_013395.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:64317-64898:+ | gene-YLR292C_SA1 | rna-NM_001182180.1_SA1 | cds-NP_013395.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:692965-693546:- | gene-YLR292C_ThermosaccDry | rna-NM_001182180.1_ThermosaccDry | cds-NP_013395.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:704855-705436:- | gene-YLR292C_VR1 | rna-NM_001182180.1_VR1 | cds-NP_013395.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:31401-31982:- | gene-YLR292C_ZTW1 | rna-NM_001182180.1_ZTW1 | cds-NP_013395.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:679026-679607:- | gene-YLR292C_Sparadoxus | rna-NM_001182180.1_Sparadoxus | cds-NP_013395.1_Sparadoxus | 92.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |