Gene name: SEC66
Reference locus (S288C): YBR171W
Gene biotype: protein_coding
Description: Translocation protein SEC66; Non-essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and import into the ER; other members are Sec63p, Sec62p, and Sec72p
Top 10 interactors (score): SEC63 (0.999); SEC62 (0.999); SEC72 (0.999); SEC61 (0.998); SBH1 (0.992); SSS1 (0.983); KAR2 (0.914); SBH2 (0.895); RER1 (0.88); KAR5 (0.788); JEM1 (0.761); STE24 (0.755); SEC12 (0.75); SED4 (0.711); SEC7 (0.699); KAR4 (0.694); SRP54 (0.69); SEC11 (0.682); ARV1 (0.679); SEC21 (0.65)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:561236-561856:+ | gene-YBR171W_AKU4011 | rna-NM_001178519.3_AKU4011 | cds-NP_009730.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:551743-552363:+ | gene-YBR171W_BG1 | rna-NM_001178519.3_BG1 | cds-NP_009730.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:564257-564877:+ | gene-YBR171W_Bruggeman | rna-NM_001178519.3_Bruggeman | cds-NP_009730.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:458370-458990:+ | gene-YBR171W_CAT1 | rna-NM_001178519.3_CAT1 | cds-NP_009730.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:553017-553637:+ | gene-YBR171W_CBS1585 | rna-NM_001178519.3_CBS1585 | cds-NP_009730.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:561097-561717:+ | gene-YBR171W_CBS436 | rna-NM_001178519.3_CBS436 | cds-NP_009730.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:650502-651122:+ | gene-YBR171W_CBS6412 | rna-NM_001178519.3_CBS6412 | cds-NP_009730.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:558573-559193:+ | gene-YBR171W_CBS6413 | rna-NM_001178519.3_CBS6413 | cds-NP_009730.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:572161-572781:+ | gene-YBR171W_CENPK1137D | rna-NM_001178519.3_CENPK1137D | cds-NP_009730.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:687078-687698:+ | gene-YBR171W_EthanolRed | rna-NM_001178519.3_EthanolRed | cds-NP_009730.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:577310-577930:+ | gene-YBR171W_FaliES1 | rna-NM_001178519.3_FaliES1 | cds-NP_009730.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000310.1:17141-17761:+ | gene-YBR171W_JAY291 | rna-NM_001178519.3_JAY291 | cds-NP_009730.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:565910-566530:+ | gene-YBR171W_MUCL30387 | rna-NM_001178519.3_MUCL30387 | cds-NP_009730.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:565196-565816:+ | gene-YBR171W_MUCL30388 | rna-NM_001178519.3_MUCL30388 | cds-NP_009730.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:551390-552010:+ | gene-YBR171W_MUCL39482 | rna-NM_001178519.3_MUCL39482 | cds-NP_009730.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:561312-561932:+ | gene-YBR171W_MUCL42920 | rna-NM_001178519.3_MUCL42920 | cds-NP_009730.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:578161-578781:+ | gene-YBR171W_NCIM3186 | rna-NM_001178519.3_NCIM3186 | cds-NP_009730.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:553959-554579:+ | gene-YBR171W_NCYC1407 | rna-NM_001178519.3_NCYC1407 | cds-NP_009730.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:566615-567235:+ | gene-YBR171W_PE2H3 | rna-NM_001178519.3_PE2H3 | cds-NP_009730.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:564291-564911:+ | gene-YBR171W_PE2H4 | rna-NM_001178519.3_PE2H4 | cds-NP_009730.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:578364-578984:+ | gene-YBR171W_S288C | rna-NM_001178519.3_S288C | cds-NP_009730.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000032.1:99607-100227:+ | gene-YBR171W_SA1 | rna-NM_001178519.3_SA1 | cds-NP_009730.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:576320-576940:+ | gene-YBR171W_ThermosaccDry | rna-NM_001178519.3_ThermosaccDry | cds-NP_009730.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:557766-558386:+ | gene-YBR171W_VR1 | rna-NM_001178519.3_VR1 | cds-NP_009730.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:551437-552057:+ | gene-YBR171W_ZTW1 | rna-NM_001178519.3_ZTW1 | cds-NP_009730.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:588801-589421:+ | gene-YBR171W_Sparadoxus | rna-NM_001178519.3_Sparadoxus | cds-NP_009730.3_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |