Gene name: SEC14
Reference locus (S288C): YMR079W
Gene biotype: protein_coding
Description: SEC14 cytosolic factor; Phosphatidylinositol/phosphatidylcholine transfer protein; involved in regulating PtdIns, PtdCho, and ceramide metabolism, products of which regulate intracellular transport and UPR; has a role in localization of lipid raft proteins; functionally homologous to mammalian PITPs; SEC14 has a paralog, YKL091C, that arose from the whole genome duplication
Top 10 interactors (score): KES1 (0.995); SPO14 (0.984); SFH5 (0.97); PIK1 (0.964); SAC1 (0.964); STT4 (0.943); PCT1 (0.934); CKI1 (0.919); CSR1 (0.863); PDR17 (0.854); OSH7 (0.843); SEC7 (0.831); YPT31 (0.819); GCS1 (0.817); OSH6 (0.807); SEC18 (0.796); PTC7 (0.781); SEC1 (0.771); VPS1 (0.762); AGE2 (0.756)
Homologues (species, bitscore): SEC14L5 (Homo sapiens, 120.2); Sec14l5 (Mus musculus, 117.1); SEC14L1 (Danio rerio, 111.7); sec14l1 (Xenopus tropicalis, 114.0); retm (Drosophila melanogaster, 105.5); T23G5.2 (Caenorhabditis elegans, 111.7); COW1 (Arabidopsis thaliana, 209.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:462935-464006:+ | gene-YMR079W_AKU4011 | rna-NM_001182578.1_AKU4011 | cds-NP_013796.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:79019-80089:- | gene-YMR079W_BG1 | rna-NM_001182578.1_BG1 | cds-NP_013796.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:405113-406183:+ | gene-YMR079W_Bruggeman | rna-NM_001182578.1_Bruggeman | cds-NP_013796.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:405429-406499:+ | gene-YMR079W_CAT1 | rna-NM_001182578.1_CAT1 | cds-NP_013796.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:395875-396946:+ | gene-YMR079W_CBS1585 | rna-NM_001182578.1_CBS1585 | cds-NP_013796.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:401190-402260:+ | gene-YMR079W_CBS436 | rna-NM_001182578.1_CBS436 | cds-NP_013796.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:508949-510020:+ | gene-YMR079W_CBS6412 | rna-NM_001182578.1_CBS6412 | cds-NP_013796.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:395133-396204:+ | gene-YMR079W_CBS6413 | rna-NM_001182578.1_CBS6413 | cds-NP_013796.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:419094-420164:+ | gene-YMR079W_CENPK1137D | rna-NM_001182578.1_CENPK1137D | cds-NP_013796.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:395767-396837:+ | gene-YMR079W_EthanolRed | rna-NM_001182578.1_EthanolRed | cds-NP_013796.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:398933-400003:+ | gene-YMR079W_FaliES1 | rna-NM_001182578.1_FaliES1 | cds-NP_013796.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:37220-38290:- | gene-YMR079W_JAY291 | rna-NM_001182578.1_JAY291 | cds-NP_013796.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:400847-401917:+ | gene-YMR079W_MUCL30387 | rna-NM_001182578.1_MUCL30387 | cds-NP_013796.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:405533-406603:+ | gene-YMR079W_MUCL30388 | rna-NM_001182578.1_MUCL30388 | cds-NP_013796.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:396163-397234:+ | gene-YMR079W_MUCL39482 | rna-NM_001182578.1_MUCL39482 | cds-NP_013796.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:402850-403920:+ | gene-YMR079W_MUCL42920 | rna-NM_001182578.1_MUCL42920 | cds-NP_013796.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:424943-426013:+ | gene-YMR079W_NCIM3186 | rna-NM_001182578.1_NCIM3186 | cds-NP_013796.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:396078-397149:+ | gene-YMR079W_NCYC1407 | rna-NM_001182578.1_NCYC1407 | cds-NP_013796.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:401789-402859:+ | gene-YMR079W_PE2H3 | rna-NM_001182578.1_PE2H3 | cds-NP_013796.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:407884-408954:+ | gene-YMR079W_PE2H4 | rna-NM_001182578.1_PE2H4 | cds-NP_013796.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:424989-426059:+ | gene-YMR079W_S288C | rna-NM_001182578.1_S288C | cds-NP_013796.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:124109-125179:- | gene-YMR079W_SA1 | rna-NM_001182578.1_SA1 | cds-NP_013796.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:396736-397806:+ | gene-YMR079W_ThermosaccDry | rna-NM_001182578.1_ThermosaccDry | cds-NP_013796.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:408374-409444:+ | gene-YMR079W_VR1 | rna-NM_001182578.1_VR1 | cds-NP_013796.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:373012-374081:+ | gene-YMR079W_ZTW1 | rna-NM_001182578.1_ZTW1 | cds-NP_013796.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:409422-410493:+ | gene-YMR079W_Sparadoxus | rna-NM_001182578.1_Sparadoxus | cds-NP_013796.1_Sparadoxus | 95.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |