Gene name: SEC10
Reference locus (S288C): YLR166C
Gene biotype: protein_coding
Description: Essential 100kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane prior to SNARE-mediated fusion; Belongs to the SEC10 family
Top 10 interactors (score): SEC5 (0.999); EXO70 (0.999); EXO84 (0.999); SEC6 (0.999); SEC8 (0.999); SEC15 (0.999); SEC3 (0.999); SEC4 (0.998); CDC42 (0.984); SEC9 (0.979); SEC1 (0.976); ARF3 (0.968); MYO2 (0.961); RHO3 (0.951); SEC2 (0.947); SRO7 (0.914); SSO1 (0.882); SNC2 (0.874); MSS4 (0.842); RCY1 (0.83)
Homologues (species, bitscore): EXOC5 (Homo sapiens, 114.0); Exoc5 (Mus musculus, 109.8); exoc5 (Danio rerio, 122.9); exoc5 (Xenopus tropicalis, 94.0); Sec10 (Drosophila melanogaster, 84.3); sec-10 (Caenorhabditis elegans, 66.6); SEC10 (Arabidopsis thaliana, 111.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:449532-452147:- | gene-YLR166C_AKU4011 | rna-NM_001182053.1_AKU4011 | cds-NP_013267.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000177.1:6765-9380:- | gene-YLR166C_BG1 | rna-NM_001182053.1_BG1 | cds-NP_013267.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:489878-492493:- | gene-YLR166C_Bruggeman | rna-NM_001182053.1_Bruggeman | cds-NP_013267.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:489408-492023:- | gene-YLR166C_CAT1 | rna-NM_001182053.1_CAT1 | cds-NP_013267.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:485029-487644:- | gene-YLR166C_CBS1585 | rna-NM_001182053.1_CBS1585 | cds-NP_013267.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:475174-477789:- | gene-YLR166C_CBS436 | rna-NM_001182053.1_CBS436 | cds-NP_013267.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:453600-456215:- | gene-YLR166C_CBS6412 | rna-NM_001182053.1_CBS6412 | cds-NP_013267.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:485335-487950:- | gene-YLR166C_CBS6413 | rna-NM_001182053.1_CBS6413 | cds-NP_013267.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:480151-482766:- | gene-YLR166C_CENPK1137D | rna-NM_001182053.1_CENPK1137D | cds-NP_013267.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:449053-451668:- | gene-YLR166C_EthanolRed | rna-NM_001182053.1_EthanolRed | cds-NP_013267.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:477980-480595:- | gene-YLR166C_FaliES1 | rna-NM_001182053.1_FaliES1 | cds-NP_013267.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000004.1:4918-7533:- | gene-YLR166C_JAY291 | rna-NM_001182053.1_JAY291 | cds-NP_013267.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:489899-492514:- | gene-YLR166C_MUCL30387 | rna-NM_001182053.1_MUCL30387 | cds-NP_013267.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:494831-497446:- | gene-YLR166C_MUCL30388 | rna-NM_001182053.1_MUCL30388 | cds-NP_013267.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:486026-488641:- | gene-YLR166C_MUCL39482 | rna-NM_001182053.1_MUCL39482 | cds-NP_013267.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:486603-489218:- | gene-YLR166C_MUCL42920 | rna-NM_001182053.1_MUCL42920 | cds-NP_013267.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:495403-498018:- | gene-YLR166C_NCIM3186 | rna-NM_001182053.1_NCIM3186 | cds-NP_013267.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:478450-481065:- | gene-YLR166C_NCYC1407 | rna-NM_001182053.1_NCYC1407 | cds-NP_013267.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:482705-485320:- | gene-YLR166C_PE2H3 | rna-NM_001182053.1_PE2H3 | cds-NP_013267.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:482449-485064:- | gene-YLR166C_PE2H4 | rna-NM_001182053.1_PE2H4 | cds-NP_013267.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:495429-498044:- | gene-YLR166C_S288C | rna-NM_001182053.1_S288C | cds-NP_013267.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000042.1:4976-7591:- | gene-YLR166C_SA1 | rna-NM_001182053.1_SA1 | cds-NP_013267.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:480504-483119:- | gene-YLR166C_ThermosaccDry | rna-NM_001182053.1_ThermosaccDry | cds-NP_013267.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:491818-494433:- | gene-YLR166C_VR1 | rna-NM_001182053.1_VR1 | cds-NP_013267.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:4873-7488:- | gene-YLR166C_ZTW1 | rna-NM_001182053.1_ZTW1 | cds-NP_013267.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:466350-468965:- | gene-YLR166C_Sparadoxus | rna-NM_001182053.1_Sparadoxus | cds-NP_013267.1_Sparadoxus | 91.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |