Gene name: SDH9
Reference locus (S288C): YJL045W
Gene biotype: protein_coding
Description: Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial; Minor succinate dehydrogenase isozyme; participates in oxidation of succinate and transfer of electrons to ubiquinone; induced during the diauxic shift in a Cat8p-dependent manner; YJL045W has a paralog, SDH1, that arose from the whole genome duplication
Top 10 interactors (score): SDH2 (0.999); SHH3 (0.997); SDH3 (0.995); RIP1 (0.99); CYT1 (0.989); SDH5 (0.986); QCR2 (0.984); SHH4 (0.982); COR1 (0.981); FUM1 (0.98); LSC1 (0.975); SDH4 (0.968); QCR6 (0.961); SDH1 (0.96); QCR7 (0.959); LSC2 (0.955); QCR9 (0.949); NDE2 (0.943); COB (0.939); QCR8 (0.934)
Homologues (species, bitscore): SDHA (Homo sapiens, 859.0); Sdha (Mus musculus, 864.8); sdha (Danio rerio, 874.8); sdha (Xenopus tropicalis, 787.7); SdhA (Drosophila melanogaster, 875.2); sdha-1 (Caenorhabditis elegans, 823.5); SDH1-1 (Arabidopsis thaliana, 887.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:338497-340401:+ | gene-YJL045W_AKU4011 | rna-NM_001181478.1_AKU4011 | cds-NP_012490.1_AKU4011 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:272902-274806:- | gene-YJL045W_BG1 | rna-NM_001181478.1_BG1 | cds-NP_012490.1_BG1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:352023-353927:+ | gene-YJL045W_Bruggeman | rna-NM_001181478.1_Bruggeman | cds-NP_012490.1_Bruggeman | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:356931-358780:+ | gene-YJL045W_CAT1 | rna-NM_001181478.1_CAT1 | cds-NP_012490.1_CAT1 | 95.6 | 97.1 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:350151-352055:+ | gene-YJL045W_CBS1585 | rna-NM_001181478.1_CBS1585 | cds-NP_012490.1_CBS1585 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:369022-370926:+ | gene-YJL045W_CBS436 | rna-NM_001181478.1_CBS436 | cds-NP_012490.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:339658-341562:+ | gene-YJL045W_CBS6412 | rna-NM_001181478.1_CBS6412 | cds-NP_012490.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:340603-342507:+ | gene-YJL045W_CBS6413 | rna-NM_001181478.1_CBS6413 | cds-NP_012490.1_CBS6413 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:338512-340416:+ | gene-YJL045W_CENPK1137D | rna-NM_001181478.1_CENPK1137D | cds-NP_012490.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:342921-344825:+ | gene-YJL045W_EthanolRed | rna-NM_001181478.1_EthanolRed | cds-NP_012490.1_EthanolRed | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:354158-356062:+ | gene-YJL045W_FaliES1 | rna-NM_001181478.1_FaliES1 | cds-NP_012490.1_FaliES1 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000200.1:58592-60490:- | gene-YJL045W_JAY291 | rna-NM_001181478.1_JAY291 | cds-NP_012490.1_JAY291 | 99.0 | 99.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:352479-354383:+ | gene-YJL045W_MUCL30387 | rna-NM_001181478.1_MUCL30387 | cds-NP_012490.1_MUCL30387 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:348240-350144:+ | gene-YJL045W_MUCL30388 | rna-NM_001181478.1_MUCL30388 | cds-NP_012490.1_MUCL30388 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:343483-345387:+ | gene-YJL045W_MUCL39482 | rna-NM_001181478.1_MUCL39482 | cds-NP_012490.1_MUCL39482 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:349599-351503:+ | gene-YJL045W_MUCL42920 | rna-NM_001181478.1_MUCL42920 | cds-NP_012490.1_MUCL42920 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:356003-357907:+ | gene-YJL045W_NCIM3186 | rna-NM_001181478.1_NCIM3186 | cds-NP_012490.1_NCIM3186 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:341601-343505:+ | gene-YJL045W_NCYC1407 | rna-NM_001181478.1_NCYC1407 | cds-NP_012490.1_NCYC1407 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:353998-355896:+ | gene-YJL045W_PE2H3 | rna-NM_001181478.1_PE2H3 | cds-NP_012490.1_PE2H3 | 99.0 | 99.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:353643-355541:+ | gene-YJL045W_PE2H4 | rna-NM_001181478.1_PE2H4 | cds-NP_012490.1_PE2H4 | 99.0 | 99.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:356024-357928:+ | gene-YJL045W_S288C | rna-NM_001181478.1_S288C | cds-NP_012490.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:151528-153432:+ | gene-YJL045W_SA1 | rna-NM_001181478.1_SA1 | cds-NP_012490.1_SA1 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:347820-349724:+ | gene-YJL045W_ThermosaccDry | rna-NM_001181478.1_ThermosaccDry | cds-NP_012490.1_ThermosaccDry | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:349744-351648:+ | gene-YJL045W_VR1 | rna-NM_001181478.1_VR1 | cds-NP_012490.1_VR1 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:329036-330940:+ | gene-YJL045W_ZTW1 | rna-NM_001181478.1_ZTW1 | cds-NP_012490.1_ZTW1 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:369586-371490:- | gene-YJL045W_Sparadoxus | rna-NM_001181478.1_Sparadoxus | cds-NP_012490.1_Sparadoxus | 90.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |