Gene name: SDH8
Reference locus (S288C): YBR269C
Gene biotype: protein_coding
Description: Protein required for assembly of succinate dehydrogenase; interacts with flavinylated Sdh1p and may function as a chaperone for free Sdh1p, protecting its FAD cofactor from redox reactions before assembly of the complex; soluble protein of the mitochondrial matrix; respiratory defect of null mutant is functionally complemented by Drosophila and human orthologs
Top 10 interactors (score): YER034W (0.915); YDL199C (0.9); YCR087C-A (0.86); PDP3 (0.813); OSW5 (0.81); RGI1 (0.767); TSR3 (0.76); SFM1 (0.747); UTP25 (0.747); NNK1 (0.746); BMT5 (0.745); PRM5 (0.7); NOC2 (0.691); BRX1 (0.677); PWP1 (0.671); OM14 (0.65); EBP2 (0.611); MPM1 (0.606); UBC5 (0.56); BXI1 (0.548)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:726447-726863:- | gene-YBR269C_AKU4011 | rna-NM_001178617.1_AKU4011 | cds-NP_009828.2_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000066.1:97467-97883:- | gene-YBR269C_BG1 | rna-NM_001178617.1_BG1 | cds-NP_009828.2_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:727607-728023:- | gene-YBR269C_Bruggeman | rna-NM_001178617.1_Bruggeman | cds-NP_009828.2_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:731333-731749:- | gene-YBR269C_CAT1 | rna-NM_001178617.1_CAT1 | cds-NP_009828.2_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:718013-718429:- | gene-YBR269C_CBS1585 | rna-NM_001178617.1_CBS1585 | cds-NP_009828.2_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:724454-724870:- | gene-YBR269C_CBS436 | rna-NM_001178617.1_CBS436 | cds-NP_009828.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:812628-813044:- | gene-YBR269C_CBS6412 | rna-NM_001178617.1_CBS6412 | cds-NP_009828.2_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:724061-724477:- | gene-YBR269C_CBS6413 | rna-NM_001178617.1_CBS6413 | cds-NP_009828.2_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:736067-736483:- | gene-YBR269C_CENPK1137D | rna-NM_001178617.1_CENPK1137D | cds-NP_009828.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:849482-849898:- | gene-YBR269C_EthanolRed | rna-NM_001178617.1_EthanolRed | cds-NP_009828.2_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:742829-743245:- | gene-YBR269C_FaliES1 | rna-NM_001178617.1_FaliES1 | cds-NP_009828.2_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000067.1:60815-61231:+ | gene-YBR269C_JAY291 | rna-NM_001178617.1_JAY291 | cds-NP_009828.2_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:729650-730066:- | gene-YBR269C_MUCL30387 | rna-NM_001178617.1_MUCL30387 | cds-NP_009828.2_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:746731-747147:- | gene-YBR269C_MUCL30388 | rna-NM_001178617.1_MUCL30388 | cds-NP_009828.2_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:716320-716736:- | gene-YBR269C_MUCL39482 | rna-NM_001178617.1_MUCL39482 | cds-NP_009828.2_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:726187-726603:- | gene-YBR269C_MUCL42920 | rna-NM_001178617.1_MUCL42920 | cds-NP_009828.2_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:741957-742373:- | gene-YBR269C_NCIM3186 | rna-NM_001178617.1_NCIM3186 | cds-NP_009828.2_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:718209-718625:- | gene-YBR269C_NCYC1407 | rna-NM_001178617.1_NCYC1407 | cds-NP_009828.2_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:741335-741751:- | gene-YBR269C_PE2H3 | rna-NM_001178617.1_PE2H3 | cds-NP_009828.2_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:739011-739427:- | gene-YBR269C_PE2H4 | rna-NM_001178617.1_PE2H4 | cds-NP_009828.2_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:742160-742576:- | gene-YBR269C_S288C | rna-NM_001178617.1_S288C | cds-NP_009828.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000019.1:97289-97705:- | gene-YBR269C_SA1 | rna-NM_001178617.1_SA1 | cds-NP_009828.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:741821-742237:- | gene-YBR269C_ThermosaccDry | rna-NM_001178617.1_ThermosaccDry | cds-NP_009828.2_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:722033-722449:- | gene-YBR269C_VR1 | rna-NM_001178617.1_VR1 | cds-NP_009828.2_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:714666-715082:- | gene-YBR269C_ZTW1 | rna-NM_001178617.1_ZTW1 | cds-NP_009828.2_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:758594-759010:- | gene-YBR269C_Sparadoxus | rna-NM_001178617.1_Sparadoxus | cds-NP_009828.2_Sparadoxus | 87.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |