Gene name: SDA1
Reference locus (S288C): YGR245C
Gene biotype: protein_coding
Description: Protein required for actin organization and passage through Start; highly conserved nuclear protein; required for actin cytoskeleton organization; plays a critical role in G1 events; binds Nap1p; involved in 60S ribosome biogenesis; Belongs to the SDA1 family
Top 10 interactors (score): IPI3 (0.999); NOG2 (0.999); NSA2 (0.999); RLP24 (0.999); RPF2 (0.999); LSG1 (0.999); NOP15 (0.999); RSA4 (0.999); RIX1 (0.999); NOG1 (0.999); NMD3 (0.999); NOP7 (0.999); ARX1 (0.999); NUG1 (0.999); ENP2 (0.998); NOC2 (0.998); NOP4 (0.998); NOP2 (0.998); NOP1 (0.998); RRP12 (0.998)
Homologues (species, bitscore): SDAD1 (Homo sapiens, 406.4); Sdad1 (Mus musculus, 402.9); sdad1 (Danio rerio, 415.6); sdad1 (Xenopus tropicalis, 340.1); Mys45A (Drosophila melanogaster, 389.0); pro-3 (Caenorhabditis elegans, 318.2); AT1G13160 (Arabidopsis thaliana, 252.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:945184-947487:- | gene-YGR245C_AKU4011 | rna-NM_001181374.3_AKU4011 | cds-NP_011761.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:225282-227585:- | gene-YGR245C_BG1 | rna-NM_001181374.3_BG1 | cds-NP_011761.3_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:952776-955079:- | gene-YGR245C_Bruggeman | rna-NM_001181374.3_Bruggeman | cds-NP_011761.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:952291-954594:- | gene-YGR245C_CAT1 | rna-NM_001181374.3_CAT1 | cds-NP_011761.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:948041-950344:- | gene-YGR245C_CBS1585 | rna-NM_001181374.3_CBS1585 | cds-NP_011761.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:951687-953990:- | gene-YGR245C_CBS436 | rna-NM_001181374.3_CBS436 | cds-NP_011761.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:938924-941227:- | gene-YGR245C_CBS6412 | rna-NM_001181374.3_CBS6412 | cds-NP_011761.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:944975-947278:- | gene-YGR245C_CBS6413 | rna-NM_001181374.3_CBS6413 | cds-NP_011761.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:979446-981749:- | gene-YGR245C_CENPK1137D | rna-NM_001181374.3_CENPK1137D | cds-NP_011761.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:933014-935317:- | gene-YGR245C_EthanolRed | rna-NM_001181374.3_EthanolRed | cds-NP_011761.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:937820-940123:- | gene-YGR245C_FaliES1 | rna-NM_001181374.3_FaliES1 | cds-NP_011761.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:90174-92477:+ | gene-YGR245C_JAY291 | rna-NM_001181374.3_JAY291 | cds-NP_011761.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:950692-952995:- | gene-YGR245C_MUCL30387 | rna-NM_001181374.3_MUCL30387 | cds-NP_011761.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:949957-952260:- | gene-YGR245C_MUCL30388 | rna-NM_001181374.3_MUCL30388 | cds-NP_011761.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:943164-945467:- | gene-YGR245C_MUCL39482 | rna-NM_001181374.3_MUCL39482 | cds-NP_011761.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:961670-963973:- | gene-YGR245C_MUCL42920 | rna-NM_001181374.3_MUCL42920 | cds-NP_011761.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:979765-982068:- | gene-YGR245C_NCIM3186 | rna-NM_001181374.3_NCIM3186 | cds-NP_011761.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:938784-941087:- | gene-YGR245C_NCYC1407 | rna-NM_001181374.3_NCYC1407 | cds-NP_011761.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:963957-966260:- | gene-YGR245C_PE2H3 | rna-NM_001181374.3_PE2H3 | cds-NP_011761.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:968796-971099:- | gene-YGR245C_PE2H4 | rna-NM_001181374.3_PE2H4 | cds-NP_011761.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:979765-982068:- | gene-YGR245C_S288C | rna-NM_001181374.3_S288C | cds-NP_011761.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000045.1:19424-21727:+ | gene-YGR245C_SA1 | rna-NM_001181374.3_SA1 | cds-NP_011761.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:958347-960650:- | gene-YGR245C_ThermosaccDry | rna-NM_001181374.3_ThermosaccDry | cds-NP_011761.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1063608-1065908:- | gene-YGR245C_VR1 | rna-NM_001181374.3_VR1 | cds-NP_011761.3_VR1 | 99.6 | 99.8 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:259755-262058:- | gene-YGR245C_ZTW1 | rna-NM_001181374.3_ZTW1 | cds-NP_011761.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:950579-952882:- | gene-YGR245C_Sparadoxus | rna-NM_001181374.3_Sparadoxus | cds-NP_011761.3_Sparadoxus | 90.9 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |