Gene name: SCW11
Reference locus (S288C): YGL028C
Gene biotype: protein_coding
Description: Probable family 17 glucosidase SCW11; Cell wall protein with similarity to glucanases; may play a role in conjugation during mating based on its regulation by Ste12p
Top 10 interactors (score): DSE2 (0.996); DSE1 (0.991); DSE4 (0.989); SUN4 (0.984); EGT2 (0.98); CTS1 (0.98); AMN1 (0.977); ACE2 (0.748); MOB2 (0.727); PIR1 (0.725); SED1 (0.715); YJL070C (0.692); DSE3 (0.687); CBK1 (0.672); BUD9 (0.668); TOS1 (0.656); TOS6 (0.568); TAO3 (0.562); HYM1 (0.552); PRY3 (0.506)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:443332-444972:- | gene-YGL028C_AKU4011 | rna-NM_001180893.3_AKU4011 | cds-NP_011487.3_AKU4011 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:131170-132798:+ | gene-YGL028C_BG1 | rna-NM_001180893.3_BG1 | cds-NP_011487.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:444342-445946:- | gene-YGL028C_Bruggeman | rna-NM_001180893.3_Bruggeman | cds-NP_011487.3_Bruggeman | 97.9 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:442340-443968:- | gene-YGL028C_CAT1 | rna-NM_001180893.3_CAT1 | cds-NP_011487.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:444803-446443:- | gene-YGL028C_CBS1585 | rna-NM_001180893.3_CBS1585 | cds-NP_011487.3_CBS1585 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:439201-440793:- | gene-YGL028C_CBS436 | rna-NM_001180893.3_CBS436 | cds-NP_011487.3_CBS436 | 97.5 | 97.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:437406-439058:- | gene-YGL028C_CBS6412 | rna-NM_001180893.3_CBS6412 | cds-NP_011487.3_CBS6412 | 97.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:441475-443115:- | gene-YGL028C_CBS6413 | rna-NM_001180893.3_CBS6413 | cds-NP_011487.3_CBS6413 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:441118-442746:- | gene-YGL028C_CENPK1137D | rna-NM_001180893.3_CENPK1137D | cds-NP_011487.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:431675-433339:- | gene-YGL028C_EthanolRed | rna-NM_001180893.3_EthanolRed | cds-NP_011487.3_EthanolRed | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:434913-436577:- | gene-YGL028C_FaliES1 | rna-NM_001180893.3_FaliES1 | cds-NP_011487.3_FaliES1 | 97.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000177.1:3645-5297:- | gene-YGL028C_JAY291 | rna-NM_001180893.3_JAY291 | cds-NP_011487.3_JAY291 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:441547-443151:- | gene-YGL028C_MUCL30387 | rna-NM_001180893.3_MUCL30387 | cds-NP_011487.3_MUCL30387 | 97.9 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:444096-445700:- | gene-YGL028C_MUCL30388 | rna-NM_001180893.3_MUCL30388 | cds-NP_011487.3_MUCL30388 | 97.9 | 98.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:440642-442282:- | gene-YGL028C_MUCL39482 | rna-NM_001180893.3_MUCL39482 | cds-NP_011487.3_MUCL39482 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:450100-451728:- | gene-YGL028C_MUCL42920 | rna-NM_001180893.3_MUCL42920 | cds-NP_011487.3_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:441281-442909:- | gene-YGL028C_NCIM3186 | rna-NM_001180893.3_NCIM3186 | cds-NP_011487.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:434652-436304:- | gene-YGL028C_NCYC1407 | rna-NM_001180893.3_NCYC1407 | cds-NP_011487.3_NCYC1407 | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:437310-438962:- | gene-YGL028C_PE2H3 | rna-NM_001180893.3_PE2H3 | cds-NP_011487.3_PE2H3 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:442360-444012:- | gene-YGL028C_PE2H4 | rna-NM_001180893.3_PE2H4 | cds-NP_011487.3_PE2H4 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:441281-442909:- | gene-YGL028C_S288C | rna-NM_001180893.3_S288C | cds-NP_011487.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:112688-114316:+ | gene-YGL028C_SA1 | rna-NM_001180893.3_SA1 | cds-NP_011487.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:454281-455902:- | gene-YGL028C_ThermosaccDry | rna-NM_001180893.3_ThermosaccDry | cds-NP_011487.3_ThermosaccDry | 98.5 | 99.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:544354-545981:- | gene-YGL028C_VR1 | rna-NM_001180893.3_VR1 | cds-NP_011487.3_VR1 | 90.4 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:432875-434527:- | gene-YGL028C_ZTW1 | rna-NM_001180893.3_ZTW1 | cds-NP_011487.3_ZTW1 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:442473-444143:- | gene-YGL028C_Sparadoxus | rna-NM_001180893.3_Sparadoxus | cds-NP_011487.3_Sparadoxus | 84.8 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |