Gene name: SCW10
Reference locus (S288C): YMR305C
Gene biotype: protein_coding
Description: Probable family 17 glucosidase SCW10; Cell wall protein with similarity to glucanases; may play a role in conjugation during mating based on mutant phenotype and its regulation by Ste12p; SWC10 has a paralog, SCW4, that arose from the whole genome duplication; Belongs to the glycosyl hydrolase 17 family
Top 10 interactors (score): YMR304C-A (0.927); PRY2 (0.913); CIS3 (0.858); TOS1 (0.835); GAS1 (0.806); CRH1 (0.802); GAS5 (0.795); EXG1 (0.772); GAS3 (0.77); CTS1 (0.767); SUN4 (0.716); SCW4 (0.704); HSP150 (0.671); UTR2 (0.668); BGL2 (0.637); SED1 (0.592); GAS4 (0.586); YMR173W-A (0.568); YHR056W-A (0.568); YBL071C (0.568)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:918625-919794:- | gene-YMR305C_AKU4011 | rna-NM_001182815.1_AKU4011 | cds-NP_014035.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:34417-35586:+ | gene-YMR305C_BG1 | rna-NM_001182815.1_BG1 | cds-NP_014035.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:864037-865206:- | gene-YMR305C_Bruggeman | rna-NM_001182815.1_Bruggeman | cds-NP_014035.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:866599-867768:- | gene-YMR305C_CAT1 | rna-NM_001182815.1_CAT1 | cds-NP_014035.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:850878-852047:- | gene-YMR305C_CBS1585 | rna-NM_001182815.1_CBS1585 | cds-NP_014035.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:873172-874341:- | gene-YMR305C_CBS436 | rna-NM_001182815.1_CBS436 | cds-NP_014035.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:961622-962767:- | gene-YMR305C_CBS6412 | rna-NM_001182815.1_CBS6412 | cds-NP_014035.1_CBS6412 | 94.0 | 97.2 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:849998-851167:- | gene-YMR305C_CBS6413 | rna-NM_001182815.1_CBS6413 | cds-NP_014035.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:873626-874795:- | gene-YMR305C_CENPK1137D | rna-NM_001182815.1_CENPK1137D | cds-NP_014035.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:910627-911796:- | gene-YMR305C_EthanolRed | rna-NM_001182815.1_EthanolRed | cds-NP_014035.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:856868-858037:- | gene-YMR305C_FaliES1 | rna-NM_001182815.1_FaliES1 | cds-NP_014035.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000096.1:36966-38135:+ | gene-YMR305C_JAY291 | rna-NM_001182815.1_JAY291 | cds-NP_014035.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:857147-858316:- | gene-YMR305C_MUCL30387 | rna-NM_001182815.1_MUCL30387 | cds-NP_014035.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:866640-867809:- | gene-YMR305C_MUCL30388 | rna-NM_001182815.1_MUCL30388 | cds-NP_014035.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:851939-853108:- | gene-YMR305C_MUCL39482 | rna-NM_001182815.1_MUCL39482 | cds-NP_014035.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:860250-861419:- | gene-YMR305C_MUCL42920 | rna-NM_001182815.1_MUCL42920 | cds-NP_014035.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:879017-880186:- | gene-YMR305C_NCIM3186 | rna-NM_001182815.1_NCIM3186 | cds-NP_014035.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:851598-852767:- | gene-YMR305C_NCYC1407 | rna-NM_001182815.1_NCYC1407 | cds-NP_014035.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:866902-868071:- | gene-YMR305C_PE2H3 | rna-NM_001182815.1_PE2H3 | cds-NP_014035.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:862888-864057:- | gene-YMR305C_PE2H4 | rna-NM_001182815.1_PE2H4 | cds-NP_014035.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:879063-880232:- | gene-YMR305C_S288C | rna-NM_001182815.1_S288C | cds-NP_014035.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000036.1:56861-58030:- | gene-YMR305C_SA1 | rna-NM_001182815.1_SA1 | cds-NP_014035.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:853023-854192:- | gene-YMR305C_ThermosaccDry | rna-NM_001182815.1_ThermosaccDry | cds-NP_014035.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:866754-867923:- | gene-YMR305C_VR1 | rna-NM_001182815.1_VR1 | cds-NP_014035.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:268244-269413:- | gene-YMR305C_ZTW1 | rna-NM_001182815.1_ZTW1 | cds-NP_014035.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:871681-872856:- | gene-YMR305C_Sparadoxus | rna-NM_001182815.1_Sparadoxus | cds-NP_014035.1_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |