SCT1 (YBL011W)


Gene profile

Gene name: SCT1
Reference locus (S288C): YBL011W
Gene biotype: protein_coding

Description: Glycerol-3-phosphate O-acyltransferase 1; Glycerol 3-phosphate/dihydroxyacetone phosphate sn-1 acyltransferase; dual substrate-specific acyltransferase of the glycerolipid biosynthesis pathway; prefers 16-carbon fatty acids; similar to Gpt2p; gene is constitutively transcribed

Top 10 interactors (score): ALE1 (0.991); AYR1 (0.976); SLC1 (0.975); PAH1 (0.974); LOA1 (0.97); TGL4 (0.966); GPT2 (0.959); GUT2 (0.943); TGL5 (0.932); LPP1 (0.925); GPD1 (0.923); GPD2 (0.923); DPP1 (0.92); GUT1 (0.917); OLE1 (0.904); PHM8 (0.9); GPP1 (0.9); GPP2 (0.9); LRO1 (0.855); DGA1 (0.854)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:197642-199921:+ gene-YBL011W_AKU4011 rna-NM_001178251.1_AKU4011 cds-NP_009542.1_AKU4011 99.9 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:187981-190245:+ gene-YBL011W_BG1 rna-NM_001178251.1_BG1 cds-NP_009542.1_BG1 98.6 99.3 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:198279-200579:+ gene-YBL011W_Bruggeman rna-NM_001178251.1_Bruggeman cds-NP_009542.1_Bruggeman 99.0 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:200840-203104:+ gene-YBL011W_CAT1 rna-NM_001178251.1_CAT1 cds-NP_009542.1_CAT1 98.6 99.3 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:189957-192209:+ gene-YBL011W_CBS1585 rna-NM_001178251.1_CBS1585 cds-NP_009542.1_CBS1585 98.5 98.8 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:198154-200418:+ gene-YBL011W_CBS436 rna-NM_001178251.1_CBS436 cds-NP_009542.1_CBS436 98.6 99.3 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:288430-290709:+ gene-YBL011W_CBS6412 rna-NM_001178251.1_CBS6412 cds-NP_009542.1_CBS6412 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:195278-197530:+ gene-YBL011W_CBS6413 rna-NM_001178251.1_CBS6413 cds-NP_009542.1_CBS6413 98.5 98.8 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:197308-199584:+ gene-YBL011W_CENPK1137D rna-NM_001178251.1_CENPK1137D cds-NP_009542.1_CENPK1137D 99.3 99.8 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:324852-327131:+ gene-YBL011W_EthanolRed rna-NM_001178251.1_EthanolRed cds-NP_009542.1_EthanolRed 99.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:212453-214732:+ gene-YBL011W_FaliES1 rna-NM_001178251.1_FaliES1 cds-NP_009542.1_FaliES1 99.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000048.1:82366-84630:- gene-YBL011W_JAY291 rna-NM_001178251.1_JAY291 cds-NP_009542.1_JAY291 98.6 99.3 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:198916-201180:+ gene-YBL011W_MUCL30387 rna-NM_001178251.1_MUCL30387 cds-NP_009542.1_MUCL30387 98.9 99.3 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:198886-201165:+ gene-YBL011W_MUCL30388 rna-NM_001178251.1_MUCL30388 cds-NP_009542.1_MUCL30388 99.9 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:189893-192145:+ gene-YBL011W_MUCL39482 rna-NM_001178251.1_MUCL39482 cds-NP_009542.1_MUCL39482 98.6 98.8 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:197322-199586:+ gene-YBL011W_MUCL42920 rna-NM_001178251.1_MUCL42920 cds-NP_009542.1_MUCL42920 99.0 99.3 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:203335-205614:+ gene-YBL011W_NCIM3186 rna-NM_001178251.1_NCIM3186 cds-NP_009542.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:191042-193321:+ gene-YBL011W_NCYC1407 rna-NM_001178251.1_NCYC1407 cds-NP_009542.1_NCYC1407 99.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:203227-205491:+ gene-YBL011W_PE2H3 rna-NM_001178251.1_PE2H3 cds-NP_009542.1_PE2H3 98.6 99.3 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:200871-203135:+ gene-YBL011W_PE2H4 rna-NM_001178251.1_PE2H4 cds-NP_009542.1_PE2H4 98.6 99.3 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:203538-205817:+ gene-YBL011W_S288C rna-NM_001178251.1_S288C cds-NP_009542.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000037.1:91055-93325:- gene-YBL011W_SA1 rna-NM_001178251.1_SA1 cds-NP_009542.1_SA1 99.0 99.6 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:212408-214687:+ gene-YBL011W_ThermosaccDry rna-NM_001178251.1_ThermosaccDry cds-NP_009542.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:194565-196829:+ gene-YBL011W_VR1 rna-NM_001178251.1_VR1 cds-NP_009542.1_VR1 98.6 99.3 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:188625-190889:+ gene-YBL011W_ZTW1 rna-NM_001178251.1_ZTW1 cds-NP_009542.1_ZTW1 99.2 99.3 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:224220-226478:+ gene-YBL011W_Sparadoxus rna-NM_001178251.1_Sparadoxus cds-NP_009542.1_Sparadoxus 89.7 99.0 Verified 1 1 1 False True False False False

Additional files